Acanthopagrus latus (yellowfin seabream): 119020481
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Entry
119020481 CDS
T08233
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119020481 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119020481 (usp4)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119020481 (usp4)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119020481 (usp4)
Ubiquitin system [BR:
alat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119020481 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
119020481
NCBI-ProteinID:
XP_036955708
EnsemblRapid:
ENSALTG00010028105
LinkDB
All DBs
Position
6:complement(17569205..17582976)
Genome browser
AA seq
1012 aa
AA seq
DB search
MMAEGGGPESGGAADSDSEPVAAQMPTPSTESQKQTIGSLLKTTLRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPVDNSGLFSDQETQALKEHLIDELDYVLVPTEAWNK
LVSWYGCLDGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMENVVTRHFSKADTID
TIEKEMRTLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASHPKSSTTPSRNFTTSPKLSSNSTASISSTVTNGDSSCSPGYTLNNSTSSGNRLG
GYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINR
ENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGAVSDLCSA
LSKLCGFPPENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVQEEDSERMNLPVYF
RERHSKHAGSSTSTMLFGQPLLITVPKHNLIADVLYDKILERIGRYVKHAQSPNSESRAS
ASASATFASCSQAPECSTSSSHNASLGGCGSPLSDGASCSASSSNGSNHSGTCNESNGLY
DGEEEAMDHQVSPEPENGHSEEEEEETSDLENGPKGDAARLCSSPAKLFTFSIVNSYGTA
NISPLPCDGNVLKLNPHSTVAIDWDTESKKLCYDEQEAEAYEKHESMLQPQKKKATVALR
ECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLD
TVVDFPIRDLNMSEFVCDPKAGPYTYDLIAVSNHYGGMGGGHYTAYGKNKVDGKWYYFDD
SSVSSATEDQIVTKAAYVLFYQRRDEEAPSKPQPSASLGGAPEAADDHMDTN
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagggaggcggacccgagtcgggtggcgcggctgactccgactcggagccg
gtagccgctcaaatgccaaccccttcaacggaaagtcaaaaacagactattgggtcactt
ttgaaaacaactctaagaaagggcgacgaatggtatctgatagacagccggtggttcaaa
caatggaagaagtacgtaggcttcgacagctgggacatgtacaatgttggagaacgtagc
ctgtatccaggaccagttgataactctgggctgttctcagaccaggagactcaggccctg
aaagagcaccttatagatgagctggactatgtccttgtacccactgaggcgtggaataag
cttgtcagctggtacggctgccttgatggccagagacccatcgtcaggaaggttgttgaa
catggcatgtttgtcaagcactgtaaggtggaggtctatttgctggaactgaacttgtgt
gaaaatgacaacatggaaaatgtggtcacacgccatttcagcaaagctgatacaatagac
actatagagaaggagatgaggaccctgttcaatatcccatcagagaaggagacacggctc
tggaacaaatacatgagcaacacgtacgagcagctgaacaagcccgacagcactgtacag
gatgctggtctcttccaggggcaggtgcttgtgattgagaggaagaacgaggatggaaca
tggcccagacaagcctcccatcccaaatccagtaccaccccatccaggaatttcactacc
tccccaaaactctcctccaactcaacagccagtatctcctcaacagtaaccaatggagac
agcagctgtagcccaggctacacactgaacaacagcacctcctccggcaacagattgggg
ggctacaattcatacagctcctcctacaactacagagagtcccagtcacagccaggccta
tgtggtcttagtaatttgggcaacacatgcttcatgaactctgccctccagtgcctgagc
aatgcatctccactcacagagtacttcctcaatgaccagtatgaggcagaaattaacaga
gagaatcccctgggaatgaggggtgagatagctgaggcctacgctgatctagtaaagcag
atgtggctaagccgcagcagctatgtggccccacgcaccttcaaaacccaggttggacgc
tttgccccccagttctcaggctaccagcagcaggactcacaggagctgttggctttcctg
ctggacgggcttcatgaagatctgaaccgtgtcaagaagaagccttacctggccctgagg
gatgcagagggccgtcccgatgagatcgttgccaaggaagcctggacgaaccatcgtttg
cgaaatgactccatcatagttgatattttccacggcctcttcaaatccactttggtgtgc
ccagagtgctctaaggtgtctgtaaccttcgacccattctgctacctcacactgcctcta
cccatgaaaaaggaccgtactatggaggtgttcctggtgcgatcagaccctcagtccaga
cccacgcagtatcgagtggtggtccctaaactgggtgcagtgtcagacctgtgcagcgcc
ttgtccaaactctgtggtttccctccagaaaatatggtggtggctgacgtttataatcac
aggttccataaaatttacagacgggatgatggcctcaaccaaatcatggaaaaagatgac
atctttgtgtatgaggtacaggaagaggacagcgagaggatgaacctgcctgtatatttc
agggagcgccactccaagcatgctggaagctccacgagcaccatgctgtttggccagcct
ttactcatcaccgtgcccaaacacaacctcatagcagacgttctttatgacaagatcctt
gagcggattggacgctatgtaaaacacgcccagagccctaacagtgaaagcagggcctca
gcctcggcctcagcaacctttgccagctgcagccaggctcctgaatgttccacatcatcc
agtcacaatgcaagcctgggcggctgtggcagccccctgtcagacggggcgtcctgcagt
gcaagttccagtaatggcagcaaccactcagggacctgcaatgaaagtaatgggctgtac
gatggtgaggaggaggccatggaccaccaagtgagtccagagccagagaacggccactct
gaagaggaggaagaggagacctctgacttggaaaatgggccgaaaggagacgcggccagg
ctttgttcttctccagccaagctcttcactttcagcatagtcaactcttacggaacagcc
aacatcagcccgctgccttgtgatggaaatgtcctcaagctcaatccacattccacagtg
gcaatcgactgggacacggagtcaaaaaaactatgttatgatgaacaggaagcagaggcc
tatgagaagcatgagagcatgcttcagccccagaagaagaaagccactgttgctctgagg
gaatgcattgagctctttacaaccatggagactcttggagaacatgacccatggtactgt
ccaacatgcaagaaacaccaacaggccacaaaaaagtttgacttgtggtcgctgccacgc
attctggtagttcatctaaagcgtttctcctacaaccgctgttggagggacaagctggac
acggtggtggactttcccatcagggatctgaacatgtcggagtttgtgtgcgaccctaag
gccggcccctacacatatgacctcattgccgtgtcaaaccactatggaggaatgggaggt
ggtcactacacagcgtacggcaagaataaagtggatggaaagtggtattactttgatgac
agcagtgtctcctctgccactgaggaccagatcgtgactaaagcagcctacgtgctgttc
tatcagcgcagagacgaggaagccccatccaaacctcagccttcagcctcgctaggagga
gcaccagaagcagctgatgaccacatggacacaaactga
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