Acanthopagrus latus (yellowfin seabream): 119023017
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Entry
119023017 CDS
T08233
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04020
Calcium signaling pathway
alat04260
Cardiac muscle contraction
alat04261
Adrenergic signaling in cardiomyocytes
alat04270
Vascular smooth muscle contraction
alat04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119023017 (cacna1fb)
04020 Calcium signaling pathway
119023017 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
119023017 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
119023017 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
119023017 (cacna1fb)
04270 Vascular smooth muscle contraction
119023017 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119023017 (cacna1fb)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119023017 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119023017
NCBI-ProteinID:
XP_036960494
EnsemblRapid:
ENSALTG00010025007
LinkDB
All DBs
Position
7:complement(353333..392756)
Genome browser
AA seq
2077 aa
AA seq
DB search
MYEERKSSGRNGYTKAVDGEEGGGEAEEEEEEGGEGCGEGGGGEGGRDEEWDEELDGENE
GGVRMTRTDTLHSTTSSTGTQRRRGQHAKKQVQGSNQVQRAPRALYCLKLNNPIRRAALS
IVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTVETFLKIL
AYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVILETMTHKSGEQATTHHVPGKPGGLDVKA
LRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMH
KTCYYIGADNYVEDDPVPCAFAGHGRQCTVNGSECRGRWDGPNGGITNFDNFFFAMLTVF
QCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKA
RGDFQKLREKQQMEEDLCGYMDWITQAEDMEELDEDGNPRPSLGDLSDKKRGKFGWFSHS
NETHASLPASETASENTVNIDEEHTNCCQACCSRMMKIGCCRTLRRWNRVCRRNCRTAVK
SVTFYWLVLLLVFLNTSLSASEHYNQPNWLTQVQDIANKVLLSLFTVEMLLKMYSLGLAH
YFVAFFNRFDCFVVCGGIMETILVELEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVA
SLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQI
LTGEDWNVVMYDGIMAYGGPVFPGMIVCVYFVILFICGNYILLNVFLAIAVDNLAGGDGD
DKKKEKKTEGAEEETEAEEEVKVDIDEDTEYEEEEELPEGEDDGGVQLKMADLAPPKEKI
LPIPEGSAFFCLSKTNPIRVACHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAHSFRNN
ILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLF
KGKFYRCTDEAKHTPEQCKGTFVVYKDGDVNHPMVRERIWQNSDFNFDNVLMGMMALFTV
STFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRE
QGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYVMFVLILL
NTVTLAVQHYEQSKQFSYVMDILNMVFTGLFTVEMLLKLLALRLRHYFVDAWNSFDALIV
VGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSLQALPY
VALLIALIFFIYAVVGMQTFGKVAMQAHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIM
LASLPGKRCDPEADYEPGEEFSCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTR
DWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLV
AMNMPLNSDGMVTFNATLFALVRTALKIKTEGNPDQENEELRGIIKKIWKRMKPKLLDEV
IPPHEEEEVTVGKFYATFLIQDYFRKFRKRKEKGDLTGETDTTNPSAIQLCKAGLKTLQD
LGPEMRLALNEDLEEDEEEVLMEEEELEENAAYKGENGFGPDKDRRGSILTTPTGPGGVV
GDGGVSNGGLIHRVGSLTKMPNGSERDEHLRHGDMRSSVNHHHPRRSSVKNGVLDHGHKR
PSYYKHGRRDSRERYWRNGDVETYGEQGYYSREEDNDSITSRDRHYLDEPPLHRDHYDGH
APYNNSSYGNSYNDGRRTTRRRLLPATPTGRKPSFNIQCLRRQGSSDDLPIPGTYHPTSP
PRRTRAQQMFNSYESRQSSGRSSAASSASWANPCPRRGRLLYAPLILVEEEGSPPWGGVG
GGGGGVEGKKGGAGRGVSVTGAAPRPAWYGGPAGTSAPPPYRAYTTLRVPSQLGAQLTEK
RGSADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLGTGSPSF
LSNVTADPAALYSDEEPIRAGRDEDELADEMTCVTSF
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagaggaaaagttctggtcgtaatggctacaccaaagctgtggatggggaa
gagggaggaggtgaggctgaggaagaggaggaggaaggaggagaggggtgtggggaagga
ggaggaggagagggggggagagacgaggagtgggatgaagaactcgatggagagaacgag
ggaggagtgaggatgacgaggaccgacacacttcactcgaccacaagttcgaccggaaca
cagaggaggagagggcaacacgccaagaagcaggtccagggcagtaatcaggtccagcga
gctcccagagcgttatattgtctgaaactcaacaatccgatcagacgagctgctctctct
attgttgagtggaaaccattcgatatcttcatcctgttagccatctttgctaactgtgtc
gctctgggtgtttctaaaccgtttcctgaggacgactccaactccaccaaccacgacctg
gaacaagtggagtacgtcttcctcatcatcttcactgtggagaccttcctgaagatccta
gcctacggtctggtgatgcaccccagctcctacatccgcaacggctggaacctgctcgac
tttgttatcgtcatcgtagggttattcagcgtcatcttggagactatgactcataaatct
ggcgagcaagcgacgactcatcacgttcctgggaaacctggaggtttggacgtcaaagct
ctgagagccttcagagtcctgaggcccctcagactggtttctggagtccccagtctgcag
attgtgttgaactctatcatgaaggcgatggttcctctgctccacattgctctgctggtt
ctcttcgtcatcatcatctacgccatcatcggactcgagctcttcataggacgcatgcac
aagacttgctactacataggagcagataattatgtggaggatgacccggtgccgtgtgcg
tttgccggtcacggtcgtcagtgtaccgttaacgggtctgagtgtcggggcaggtgggat
ggtcccaatggaggaatcaccaactttgacaacttcttcttcgccatgttgacggtgttc
cagtgcatcacgatggagggctggaccgacgtcctctactggatgaacgatgccatcggg
ttcgagctgccctgggtttattttgtcagtctggtgattttcggatcgttctttgttctc
aacctggttctgggagtcctcagcggagagttcagtaaggagagggagaaggcgaaggct
cggggagatttccagaagctgagggagaagcagcagatggaggaggatctgtgtgggtac
atggactggatcactcaggccgaggacatggaggagctggacgaggacggaaacccacgt
ccgtctctcggtgatttatctgataagaagagagggaagtttggatggttcagtcactct
aatgagacacacgcgagtcttcctgccagtgaaacagcctctgaaaacactgtgaacatt
gacgaggaacacaccaactgctgccaggcctgctgctctcggatgatgaagatcggctgc
tgtcggacattacgtcgctggaatcgtgtctgtcgcaggaactgtcgcaccgccgtcaaa
tcggtgacgttctattggcttgttctgcttctcgtcttcctcaacacctccctcagcgcc
tcggagcactacaaccaacccaactggctgactcaggtccaagacatcgccaacaaggtg
ctgctgtctctgttcaccgtggagatgctgctgaagatgtacagtctgggattggctcat
tacttcgtggcattctttaaccgcttcgactgcttcgtggtgtgtggcggcatcatggag
acgatcctggtggagctggagatcatgcctcctctgggcatctcggtgctgcgctgcgtc
cgcctgctcaggatcttcaaggtcacacgccattggacggctctgtccaatctggtggcg
tctctgctgaactccatgaagtccatcgcctccctgctgctgctcctcttcctcttcctc
atcatattcgctctgcttggtatgcagctgttcggagggaagttcaactttgacgagacg
cagaccaaacgcagcaccttcgacgccttcccccaggcgctgctcacctgcttccagatc
ctgacgggtgaggactggaacgtcgtcatgtatgacggcatcatggcgtacggaggcccc
gtgtttccagggatgattgtctgcgtttacttcgtcatcctcttcatctgtggtaactac
atcctgctgaatgtcttcttggccatcgctgtggacaacctggctggaggagacggggat
gacaagaagaaagagaagaagacagagggagcggaggaggagacggaggctgaagaggaa
gtgaaggtggacatcgatgaagacacagagtacgaggaggaggaggagcttcctgaagga
gaggatgacggaggagtccagttaaagatggccgaccttgctcctcctaaggagaagatt
cttccaatcccagaaggcagtgcgttcttttgcctcagcaagacaaaccctatccgtgtg
gcctgtcacactctgatccaccatcacatcttcaccaacctcatccttgtcttcatcatc
ctcagcagctgctcattggctgctgaggatccaatcagagcccactccttcaggaacaat
atcttgggttatgcagactacgccttcacctccatctttactgtagagatcctgctgaag
atgacggtccacggagcgttcctccatcagggctcgttttgcagaaactggttcaacttg
ttggatctgctggtcgtcagcgtttctctggtctccttctttctgcactccagcgccatc
tcagtggtgaagatcctgagagtcctgcgggtcctcagacctctgagagccatcaacaga
gccaaaggccttaagcatgtggtccagtgtgtgtttgtcgccatcaggacgatcggaaac
atcatgatcgtcacgactctgctgcagttcatgttcgcctgcatcggagttcagctgttc
aagggtaaattctatcgctgcacagacgaggccaaacacactcctgaacagtgcaaaggg
accttcgtggtgtacaaagacggagatgtgaaccacccgatggtccgggagaggatctgg
cagaacagtgactttaactttgacaatgttctgatggggatgatggcgctgttcaccgtg
tcgacttttgagggctggcccgcgctgctgtataaagccatcgacgctaacggggagaac
tccggtcccatctacaactaccgggtggagatctccatcttcttcatcgtgtacatcatc
atcatcgccttcttcatgatgaacatcttcgtgggttttgtcatcatcaccttcagagag
cagggagagcaggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtggag
tacgccctgaaggctcagccactgaaactgtacatcccaaagaatccagtccagtataag
ttctggtccatcatcaactcaacaggattcgagtacgtcatgttcgtcctcatcctgctc
aacaccgtcactctggctgttcagcactacgaacagtccaaacagttcagctacgtcatg
gacatcctcaacatggtgttcactggactcttcactgtggagatgctgctgaagctgctt
gcgctcagactcaggcattacttcgtggatgcctggaactcatttgacgctctgatcgtg
gtcggcagcgtcgtcgacatcgtcgtcactgagttcagtagtggggaggacagttctcgg
gtgtcgatcaccttcttccgcctatttcgagtgatgcgattggtcaagctgctgagcaaa
ggggaggggattcgtacgctactgtggacgttcatcaaatcactacaggctctgccgtac
gtcgctctgctcatcgccctgatcttcttcatctacgccgtcgttgggatgcagacgttt
gggaaggtagcgatgcaggctcacacccagatcaacagaaacaacaacttccagacgttt
cctcaggcggtgctcctgctcttcaggtgtgctacaggtgaggcgtggcaggagatcatg
ttggccagtcttccaggtaaacgctgcgaccccgaggccgactacgagcccggagaggag
ttcagctgcggcagcaactttgccatcgtttattttatcagcttcttcatgctgtgtgct
ttcctgatcattaacttgttcgttgctgtcatcatggacaactttgactatctgacacgt
gattggtcgattctggggccgcatcacctggacgagtttaagaggatctggtctgaatac
gatccagaggccaaaggtcggatcaaacacctggatgtcgtggcgctgctcaggaggatt
cagcctccgctgggatttgggaaactctgtcctcacagagtagcctgtaagcgtctggtg
gcaatgaacatgcctctgaacagtgacgggatggtgacctttaacgccacgctctttgct
cttgttcgcactgccctcaagatcaagactgaaggtaaccctgaccaggagaacgaggag
ctgagggggatcatcaagaagatctggaagagaatgaaaccaaaactactggatgaagta
ataccaccacacgaagaggaggaagtgactgtggggaagttttatgcgaccttcctgatc
caggattacttcaggaagttcaggaagaggaaggagaaaggagacctgacgggagagaca
gacaccaccaacccatctgctatacagttgtgtaaagccggtctaaagactctgcaggat
ctgggtccagagatgcgtctggctctgaacgaggacctggaggaggatgaggaggaggtg
ctgatggaggaggaggagcttgaagagaacgccgcctacaagggtgaaaacgggtttgga
ccggacaaagaccgccgaggctccatactgaccacacccaccggtcctggcggtgttgtc
ggggacggtggtgtgtctaacggaggtctgatccaccgggtcggctctcttaccaaaatg
ccgaacggcagcgagcgtgacgaacaccttcgccatggagacatgaggtcatctgtcaat
catcaccatcctcgccgctcgtcagtaaagaatggcgtgctggaccacggccacaagagg
ccgtcatactacaaacatggaaggagggattcaagggagcgatactggaggaacggagat
gtggagacgtatggagagcagggttactacagcagagaggaggacaacgacagcatcacc
tccagagacagacattaccttgacgagcctcctctgcacagagaccactacgatggccac
gccccctacaacaacagtagctatggcaacagttacaacgacggcagaaggacaacccgg
agacggctacttcctgccacacccacaggtcgaaagccatcgtttaacattcagtgtctg
aggaggcagggcagcagcgatgacctgcccatccccgggacgtaccaccccacctccccg
ccacgccgcaccagagcacagcagatgttcaacagttatgagtctcgtcagtcttctggt
cgctcctcagcagcgtcctcagcgtcctgggccaacccgtgtcctcgccgcggtcgcctc
ctctatgctcctcttatcttggtggaggaggaaggcagcccgccctggggaggagtaggt
ggagggggaggaggagtggaggggaagaagggaggagcaggaagaggtgtcagtgtgaca
ggtgcagcacccagaccggcctggtacggtggccctgcagggacatcagctcctcccccc
tacagagcgtacaccaccctcagagttccctcgcagctcggcgctcagctgacagagaaa
cgaggctcggccgacagtctggtcgaggcggttctcatctcggagggtctcggtctttac
gctcgcgatccaaaatttgtggcgtttgcgaagcgggagatcgccgacgcatgtcacatg
acagtggacgagatggagtcagccgccagcgacctgctcggcacggggagccccagtttc
ctcagcaatgtcaccgctgaccctgccgcactttacagcgacgaggagccaatcagagcg
ggccgcgacgaggacgagctggccgacgagatgacctgtgtgacatcattctga
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integrated database retrieval system
