Acanthopagrus latus (yellowfin seabream): 119025785
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Entry
119025785 CDS
T08233
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03410
Base excision repair
alat04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119025785 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119025785 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119025785 (parp4)
03036 Chromosome and associated proteins [BR:
alat03036
]
119025785 (parp4)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119025785 (parp4)
Enzymes [BR:
alat01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
119025785 (parp4)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119025785 (parp4)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119025785 (parp4)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119025785 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
VWA_CoxE
TniB
Motif
Other DBs
NCBI-GeneID:
119025785
NCBI-ProteinID:
XP_036965614
EnsemblRapid:
ENSALTG00010012738
LinkDB
All DBs
Position
9:4960118..4985474
Genome browser
AA seq
1844 aa
AA seq
DB search
MAVFENCSILLELKNVPFKQKRRLKSAITDNGGNICFVVHQQCSLIVTSDVSNLSTNRLR
SIQKYQTPVVGVDYVYSCVERGDLLPVDGYRLDVPSPSASSNPPPVFSWMQQSGNPPNKY
QGSKVPTSKAAAEPSKIPTNPATQGAETPHSSENVLGKFRIYTETDSDLPPYPDNFQVAK
FSIFEKIKSNSWCVLELHSLRRENGSQYRVVRYWKEDILSKKMEVRDLLVFLSTSEDAVE
VYKELRDTLQASGLQLRSSLPPQARHLGSAPLQQLLLEKKLNTGSLSQEVGTFVELLWTE
ALGCLSNILRVSVDKLSLNDVSRVEGLLLQAQMKLKEANHAEVACLLDEVHTLLPLKTRS
PPSAKLISQLLDLCQLIRDVLNVSEMTLRSPVPSCLGKYRALRCSIETVPRSSSEFQAVT
ALLQDSKVQIQQVLRVSRGVELQTFKSDLGNIKPLLHSSSPSNFVGLLSRGLLLPRVGVE
HHGIDRTDAGNLGSGIYFGDAVGTSLKYSKASVTDGSRLLLVCDVVLGHCRDVHKRDPTL
TQAPEGHHSVHGVRRTPNTHSEFEDDEYVVYSPDQVKLKYVVQFSIEGDQLKEFSPDIVT
SAEPCLPSSDQELSSEENGVESINNPLEGVTAGLLDSSGQQIPLQAVHVKCKLMDLLSQV
VIFQKYTNMSSVPIEAKYVFPLDDSAAVCGFEAFINGKHVVGQVKEKETARKEYKQAIEK
GHGAYLMDQDAPDVFTISVGNLPSGATVLIKVTFVSELIIKDGSILFSLPGSVAPWQESA
ALNQTTQVTVEKVCVTDEAASKREFTLDMSVEMPYEITSLECITHQIKIKRTDCKAVVSV
LPGEVMGPDGFQLSVTLSEVHLPRMWVEKHPSNDSQACMLVFYPDFDVNSSSASDEVVLL
LDTSESMKGESLRTAQRIALQVLKTLDKKLRVNVILFGTDHTDAFLTAQPLVKGRQAAES
FIRCLNPVGGSTELWRPLRALSLLPPSQGVRNLLLLSDGHIQNAELTLQLLRDNVQHSRL
FTCGLSPTANRHMLRALAQSGGGAFEFFDTKTKHNWAEKVARQVKRMASPGCNSVSVKWQ
QFNPTAPPPIQAPKQLNALFSDSHTLVYGFVPHCTQATLLGNLSGQELKTMVSTTELQKT
RGTFVHKLTARALIRDYEDGSLAPDEAEHEGKKAELKSFIITLSKEFSILSQFTSFVAIE
ERDSEQAEGFTDIPKLIAEEDVDFLPYISWITPKRHGKCLDYTDPGESDDEEEDDDMGFG
LLSPSSLSYMPGDGLKSPICLENVEWKDEDGEDQLEKSEESFWECYDAAEECSMQPSPTG
ASPFPLAFAEMDFLCPPSNSSHAQAHTSPVLRPPPPICLGLPTPPPPPPPPDIYRFSPLS
CRLPLPPPLPAPHTSSSAFSFGSPPPPHLLLGAPPPPHPPTSSSAFSIGPPPPPLHPPGL
PAFFPSFPSQRVGFGASAPSDGLLFGATPRPVCGFSAPSDGLLFGSALTPVSHSVEQQTQ
QMSWQPQLEVDCQVASFTRGYRHKGKKMRHTDTKGYQKYAEELHVTEGGSEQSSLTSVLG
TVGSTAVSSLLHRYKGLSRPQRFLQMTNCGVGDSDVIEGSPERSEAPSPKTHNMLDDTEI
QKDLIRFDSIAMGGSEPAADGSEYMFMAQKRFKQKAKTIQVRRHALTSSSMLQQPSESAD
PEVLKLRWTKIFQMQQSEGYWELTTELGECINVDVYCFANVFLKSRGIQSLGAKAHADIL
RLVATLLVLQLMRVEKLEEGKLLRTLFCLDDSSQPRPERWEEVKRAVDWVCWADRQYPCV
YSRLEFGLSWESSTRQLLGYEGLPPSSPLCGLNLRRTPAPLLVH
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgagaactgctccatccttctggagctgaagaatgtgcctttcaagcag
aagaggaggttgaagtcggcaataacagacaatggaggaaacatttgctttgtggtccat
caacagtgctctctgattgtgaccagtgatgtctccaacctgagcaccaacaggctgcgt
agcatccaaaaataccaaacgcctgtggtcggggtggattatgtgtacagctgtgtggag
agaggagatcttctgcctgtggatggatacaggctggatgtgccctctccctccgcttct
tcaaaccctcctcctgtcttctcatggatgcaacagagtggaaatccaccaaataaatac
caagggtccaaagtaccaacaagcaaagcagctgctgagccatccaaaatccccaccaat
cctgcgactcagggggcagagactccacacagcagcgaaaatgtcctggggaagttcagg
atttatactgaaacggattctgaccttccaccgtatccggataattttcaagtggccaag
ttttcaatcttcgaaaagataaagagcaactcttggtgtgtgctggagctgcatagtctc
agaagggagaatggatctcagtaccgagtggtccggtactggaaggaagatatattatcc
aagaagatggaggtgagggatctgctggtgtttctgtccacatcagaggatgctgtggag
gtctacaaggaactcagagacaccctgcaggcttctggtctgcagctgaggagcagcctc
cctcctcaggccaggcacctgggctctgccccccttcagcagctactgctggagaagaag
ctgaacacaggaagcttatcacaggaagtgggcacatttgtggagctgctgtggactgag
gccctcggctgcctgagcaacatcctcagggtttcagtcgacaagctcagcctaaatgat
gtgagcagggtggagggcttgttgcttcaggctcagatgaagctgaaggaggcgaatcat
gctgaggtggcgtgtctcttggatgaggttcacaccctgctgccactcaaaacacgctca
cctccaagtgccaagctcatttcccagttgctggacctatgtcagttaatcagagatgtt
ctgaacgtgagtgagatgacgttgaggagccccgtgccttcctgtctggggaagtaccgc
gctctgaggtgcagcattgagactgttccccgcagcagctccgagtttcaggctgtgacc
gctctgctgcaggacagcaaggtgcagatccaacaggttctgcgtgtcagcagaggcgtg
gagctccagacatttaagagtgatcttgggaacattaagcccctccttcattcctccagc
cccagcaactttgtaggactcctgtctcgtggtctgctgctgcctcgtgttggagtggag
catcatgggatagacagaacagacgctggtaatctgggcagtggaatctactttggtgat
gctgttggcaccagtttgaaatactcaaaggccagtgtgacggacggctctcgactgctg
ctggtgtgtgatgtggtgttgggacattgccgggacgtccacaagagagatccaacactg
acccaggctcctgagggacaccacagcgtgcatggggtccgccgcaccccaaacactcac
tctgagtttgaggatgatgagtacgtggtgtacagtcctgatcaagtgaaactcaagtat
gtggttcagttcagcatcgaaggagaccagctgaaggagttcagtcctgacatcgtcacc
tcagcggagccatgtctgccctcttctgaccaagagctcagctcagaggagaacggggtt
gaaagcattaacaaccctctggagggagtgacggctggactgttggacagctctggtcag
cagatccctctgcaggccgtccatgtgaagtgcaaactgatggacctgctttctcaggtc
gtcattttccaaaaatacaccaacatgagctctgtgcctattgaagccaagtatgtcttc
ccgttggatgattctgcagcagtgtgtggatttgaagctttcatcaatgggaaacatgtg
gtgggacaggtgaaggagaaagagactgctcgcaaagagtacaagcaggctattgagaaa
ggccacggagcctatctcatggaccaggacgctcctgatgtgttcaccatcagtgtgggc
aatctgccttccggtgcgactgtcctcattaaagttacctttgtgtctgagctgatcatc
aaggacgggagtattctcttctccctgcccgggagtgtggctccatggcaggagagtgca
gcgctcaaccagaccacacaggtcactgtggagaaggtgtgtgtgaccgatgaggcagcc
agcaagagagagttcactctggacatgtcagttgagatgccgtatgagatcaccagcctg
gaatgcatcactcaccaaatcaagattaagagaaccgactgcaaggcagtggtgagtgtg
ctgccaggagaggttatgggtccagatggtttccagctgtcagtcactctatctgaggtc
cacctgcccaggatgtgggtggagaaacacccaagcaacgacagccaggcctgcatgtta
gttttctatccagactttgacgtcaactccagttcagcatctgatgaagtcgtcctgctg
ctggacacatctgagtctatgaagggagagtctctccgcacggcgcagagaatcgccctg
caggtcctcaaaaccctcgacaagaagctcagagtcaatgtcattttgtttggcacagat
cacacagacgctttcctgacagctcaaccgcttgttaaaggtcggcaagcagcagaaagc
ttcatcaggtgccttaacccagtagggggcagcactgagctgtggaggcctctgcgagct
ctcagcctgctgcctccatcccaaggtgtcaggaacctgctgctgctgtcagacggccac
atccagaacgcagagctcaccttgcagctgctcagagacaatgttcagcacagccgcctc
ttcacctgcggcctcagcccaacagccaatcggcacatgttgagagcccttgcccagtcc
gggggcggagcctttgaattttttgacacaaaaaccaaacacaactgggcagagaaggta
gcacgtcaggtgaagcgcatggcatctcccggctgcaactcagtgtcagtaaagtggcag
cagttcaacccgacagcccctcctcctatacaagcccccaagcagctcaatgctctgttc
agtgactctcacacactggtttatggttttgtgccgcactgcactcaggccacactgctt
ggaaatctgagtggtcaggagctcaaaaccatggtgtcgaccactgagctgcagaagacc
aggggcacatttgttcacaagctcacagcaagggccctcataagggattacgaagacgga
agcctggcccccgatgaagctgaacatgaggggaagaaagcagagctgaagagcttcatc
atcacgttaagcaaagagttctccatcctgtcacagttcaccagctttgtggccatcgag
gaaagggattcagagcaggcagagggcttcacagacatccccaagttgatcgcagaggaa
gatgtggacttccttccctacatcagctggattactcctaagcgtcatggaaaatgtcta
gattatactgaccctggagaatctgacgatgaagaggaagatgatgatatgggttttggc
cttctgtcacctagttcactatcatatatgcctggagatggtctaaaatctccaatttgt
cttgaaaatgtggaatggaaagatgaagatggggaagaccagcttgaaaagtctgaagag
agcttctgggagtgttacgatgcagctgaagaatgctcgatgcagccttcacccacaggt
gcctcgccttttccactcgcatttgcagaaatggattttctttgtccaccaagtaactct
tcacatgcacaagcccacacctctccagtccttcgtcctccccctcctatatgtttggga
ctcccaactcctcctcctcctcctcctcctcctgacatttatcgcttttcacccttaagt
tgtcgtcttcctcttcctcctcctcttcctgctcctcacacttcttcttctgcattctca
tttggttctcctcctcctcctcatcttcttcttggtgctcctccccctcctcatcctccc
acttcttcctctgcattctcaattggtcctcctcctcctcctcttcatcctcctggtctt
cctgctttctttccttcttttccttctcagagagtcggatttggtgcatctgcaccttca
gatgggcttttatttggtgctacgcctcgtcctgtttgtggattttctgcaccttcagat
gggcttttatttggcagcgctctaactccagtcagtcactcagtggagcaacaaacccaa
caaatgtcttggcagccacagttagaagttgattgtcaagttgcttcatttacccgggga
tacagacacaagggaaaaaaaatgaggcatacagatactaagggttatcaaaagtacgct
gaagagttacatgtcacagaaggaggatcagaacagtcttccctaacctcagtcttaggc
acagttgggtccacagctgtctccagcttactccacagatataaaggactgagtcggcca
cagcggtttcttcagatgactaactgtggtgtcggtgattctgacgtcatagagggatct
cctgagagatcagaagccccttcccccaaaacacataacatgctggatgatactgaaatt
cagaaggatttgattcgattcgattcaattgcaatgggtggaagtgaacctgctgctgat
ggaagtgaatatatgttcatggcgcagaaacggtttaaacaaaaagcaaagaccattcaa
gtgagaaggcatgctctgacttcctcttcaatgttacaacaaccctctgagtcagcggat
cctgaagtactgaagctcagatggaccaagatcttccagatgcagcaatcagagggctac
tgggagttaaccacagagctgggagaatgcatcaatgtcgatgtatattgctttgccaac
gtgttcctgaaaagcaggggcatccaatctctaggcgcgaaggcccatgcggacatcctg
aggctggtggctactcttctggtgctgcagctgatgagggtggagaagctggaggaaggc
aaactgctccgcaccctcttctgcctggacgactcctctcagcccaggcctgagcggtgg
gaggaggtgaagagagcagtggactgggtctgctgggctgaccggcagtacccatgtgtc
tacagccggctggagttcggtctgagctgggagtcctccacacgtcagctgctgggctac
gaaggactccctccttcctcacctctgtgtgggctgaacctgcggagaacccctgcccca
ttactggtccactga
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integrated database retrieval system
