Acanthopagrus latus (yellowfin seabream): 119033055
Help
Entry
119033055 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119033055
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119033055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-Nse
zf-rbx1
U-box
Prok-RING_4
DUF4618
zf-ANAPC11
Gp58
DUF1444
DUF6830
Leu_zip
Perilipin
Motif
Other DBs
NCBI-GeneID:
119033055
NCBI-ProteinID:
XP_036978539
LinkDB
All DBs
Position
15:27643809..27646228
Genome browser
AA seq
463 aa
AA seq
DB search
MASRLEEDLCCPVCHDVFREPVVLSCSHSFCKDCLQSWWTERRTRECPVCKRRSSMEPPL
SMQLKKLCENFLQDRDQRASEDLCSRHSEKLKLFCLDHQQPVCLVCRDSEQHANHRFRSI
DEAARQHKKELQETLEPLKKKLKVCEEVKVKFDQTAEHMKVQARHTERQIKDQFKKLHQF
LAEEEEARMAALREEEEQKSQMMQEKMEALSREIAALSHTVRATEEQLRAEDVSFLHNYK
AAVERVQQRPLLEDPQLPSGALIDQAKHLGNLSFNIWNKMKDMVSYTPVVLDPNTAHPKL
ILSEDLSSVRGGERQKLPVNPERFDVYRSVLGSEGFNSGTHSWDVEVGDSTCWLLGVCAE
SVQRTGLIQSGLWRIGLYEGKYSVRSPPAPPTGLVVQKKVQRIRVNLDWNKGKLSFSDPD
TDTHLHTFTHTFTQRMFPVFFTGYELPVKILPLKMCVTVKQSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaggttagaggaggatctctgctgtccggtgtgtcatgatgtcttcagagag
cctgtcgttctgtcatgtagccacagcttctgtaaagactgtctgcagagctggtggaca
gagagacgaacacgggagtgtccagtctgtaagagaagatcttcaatggaaccaccttta
agcatgcagttaaagaagctgtgtgagaacttcttacaggacagagatcagagagcttca
gaggatctctgcagtcggcactctgagaaactcaaactcttctgtctggaccatcagcag
ccggtgtgtctcgtctgcagagactcagaacaacacgccaaccacagattcagatccatc
gatgaagctgcacgacaacacaagaaggaacttcaggaaactctggagcctttaaagaag
aagttaaaggtttgtgaagaagttaaagtgaagtttgatcagacagcagaacacatgaag
gtccaggcccgacacacagagaggcagatcaaggatcagtttaagaagctgcaccagttt
ctagcagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaagagt
cagatgatgcaggagaagatggaggctctgagcagagagatagcagctctttcacacaca
gtcagagccacagaggagcagctgagagctgaagacgtctcattcctgcacaactacaag
gctgcagtggaaagagtccagcagcgccccctgctggaggatccacagctgccctcagga
gctctgatagaccaggccaaacacctgggcaacctgagcttcaacatctggaacaagatg
aaggacatggtctcctacactcctgtggttctggacccaaacactgctcatccaaaactc
atcctgtctgaagatctgagcagtgtgagaggaggagagagacagaagcttcctgttaac
ccagagaggtttgatgtgtacaggtctgtcctgggctctgagggctttaactcagggact
cacagctgggacgtcgaggttggagacagtacatgctggttactgggtgtgtgtgcagag
tctgtccagaggactggactcatacagtctggattatggagaatagggttatacgaaggt
aaatactcagtgcggtcaccaccagctccacccactggtcttgtagtgcagaagaaggtc
cagaggatcagagtgaatctggactggaacaaaggaaagctgtcgttctctgatcctgat
actgacacacacctacacaccttcacacacactttcactcagaggatgtttccagtcttt
ttcactgggtatgaactcccagtgaagattttacccttgaagatgtgtgtgacagtgaaa
cagagcagttaa
DBGET
integrated database retrieval system
