Acanthopagrus latus (yellowfin seabream): 119033240
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Entry
119033240 CDS
T08233
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119033240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119033240
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119033240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119033240
NCBI-ProteinID:
XP_036978974
EnsemblRapid:
ENSALTG00010010527
LinkDB
All DBs
Position
15:28772486..28814272
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AA seq
649 aa
AA seq
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MSAYTVSLPGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLVQGDIIVAIDGVSTEG
MTHLEAQNKIKMANYNLALTMSKSKRPIPMMTPRIDASALPSLIPHQQPQSVQVNGRLSA
CSASSGPAEAAAVSPNQRKQYNSPIGLYSEDTLREMATIQAGRPAGSVPVKEHLVDSASA
VYRAVQSAEKDPELGDRGCHCTSMQSKSFQVLTHMTQTESTPGEKEEVLRRSSPTEHAPA
SADSAPTAAPPASAALQPWDNVPASSDPAPHSLKRQSAAGYNFQHKAAVSSPYAQPPLMH
QAPQAPPPQHYQPIPQQYQQPPMQQFPPTQQSSIQIPLGPAPPKVVSTACIYPSQPGPAL
APSLIPPPQPRPPATAPAPASTGPASAGRPPWVADPNFADKFDPSKMTTTVKVQPLPQAA
PPPPAYIPNPSPAAPAAPSPAPITPSPAPFSPVARGVAQRAERFAASSRTPLCGACNSVI
RGPFLVALGRSWHPEEFNCHYCHMSLADVSFVEEQNNVYCENCYEEFFAPTCARCNTKIM
GEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEA
GDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctacaccgtgtcgctgcccggccccggcccctggggcttcaggctgcagggc
gggaaggacttcaacatgccgctgaccatctccaggatcactccgggcagcaaggcggcg
cagggtaacctggtccagggtgacatcatcgtggccatcgatggcgtcagcacggagggg
atgactcacctggaggctcagaacaagatcaagatggctaactacaacctggcgctcacc
atgagcaagtcgaagcgtcccattccgatgatgacaccacgaatcgacgcctccgctctt
ccctcactgatcccccaccaacagcctcagtcggtgcaggtcaacggccgactgtcggcc
tgcagcgcctcctccgggcctgcagaggcggcggcggtcagcccgaatcagaggaagcag
tataactctccgatcggcctgtactcagaggacactctgagggagatggcaaccattcag
gcgggtcggcctgcgggttctgtcccagttaaagagcatcttgtagacagcgcttctgcc
gtctaccgggccgtccagagtgcagagaaggacccagagttgggtgacagggggtgccac
tgcaccagcatgcagtccaagtctttccaggtcctcacccacatgacccaaactgagtcc
acaccaggagaaaaggaggaggtgcttaggaggagcagccctactgagcatgctccagct
tctgcagactccgcccccactgctgctccacctgctagcgccgccctgcagccttgggat
aacgtccctgcttcgtctgaccccgcccctcacagtctgaagcgacagtctgccgctggt
tacaacttccagcacaaagctgctgtctccagcccgtacgctcagcctcctctgatgcat
caggcaccacaggccccgcctccacagcactaccagccaatcccccagcagtaccagcag
cctcccatgcaacagttcccgcccacacagcagagctccattcagatccctcttggcccc
gcccctcccaaggtggtcagcactgcctgcatctacccctcccagccaggtccggctctc
gcaccatctctaatcccacctcctcagccccgccccccagctactgcccccgcccctgca
tcgactggccccgcctctgctggcagacccccttgggtggctgaccccaacttcgctgat
aagttcgaccccagtaagatgaccaccactgtgaaggtgcagccactgccccaagctgcc
cctcctccaccagcatacatccccaatccctcccccgctgcacctgcggctcccagcccc
gcccccatcacaccaagccccgccccattctctcctgtggcaaggggcgtggcccagagg
gcggaacggtttgctgccagcagccgtacgcctctgtgtggagcctgtaacagcgtcatc
aggggcccgttcctggtggctctgggtcggtcctggcaccccgaggagtttaactgtcac
tactgccacatgtctctggctgatgtcagcttcgtggaggagcagaacaacgtctactgt
gagaactgctacgaggagttcttcgcccccacctgcgcccgctgcaacaccaagatcatg
ggggaagtgatgcacgctctgcggcagacatggcacaccacctgctttgtgtgtgccgcc
tgtggcaaacccttcggaaacagcctcttccacatggaggacggagagccatactgcgag
aaagattatgtcgctttgttcagcaccaagtgtcacggctgtgacttcccggtcgaagct
ggtgataagttcatcgaggctctgggtcacacctggcatgatacctgcttcgtctgtgcg
gtgtgccacgtgaacctggagggtcaacctttctactcaaagaaagacaaacctctgtgc
aagaagcacgctcatgccatcaacgtgtag
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