Agrobacterium larrymoorei: CFBP5473_03235
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Entry
CFBP5473_03235 CDS
T06268
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
alf
Agrobacterium larrymoorei
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA
HTH_7
Mg_chelatase
AAA_2
HTH_22
F_bP_aldolase
HTH_23
Phage_AlpA
IstB_IS21
RWP-RK
HTH_28
MCM
HTH_17
FleQ
HTH_29
dnstrm_HI1420
AAA_7
TetR_N
Phage_CP76
Motif
Other DBs
NCBI-ProteinID:
QCI97013
UniProt:
A0A4D7DIA9
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Position
circular:707822..709387
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AA seq
521 aa
AA seq
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MTAQVLVIDDDPVQRRLLKNAVERYGHQPLLAEHGKAGLELLKQHSGDISVVVLDLMMPE
MDGLSFLKAVGELGTDVPVIVQTGQGGIDTVVQAMRAGAFDFVVKPVSPERIGTAIANAL
KLDQREAKARTGRRSRNHAVGFSDIVSASPAMLRVIELAQRAAQSNIPVVLEGESGVGKE
MIARAIQSGGDRAGKPFITVNCGAIPHNLVESILFGHEKGAFTGATEKHVGKFMEADGGT
LFLDEIGDLPLEVQVKLLRAVQQGEIETVGSTRVQKVNVRLISATNKNLIDEVKEGRFRE
DLYYRLNVFPITIPALRRRKEDIPYLARVFAERFSLEQKLPHPLGVSADALALLTAYDWP
GNIRQLENAVFRAVVLAQGDELTDSDFPQIALQVPEFAGDLDEREALHRPTERSLLVAPP
PSVESRNSAAEIMSVMEAMASEEEHMPEGVFPGGSLIASTDESGNVRKIAEIEEELIRFA
LRFYRGQMSQVARKLGIGRSTLYRKLKDYGIDPDDPLRDAA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcaagttctcgttatcgatgacgatcccgttcagcgccgcctgcttaagaac
gccgtggaacggtatggacaccagccgctgcttgccgaacatggcaaggcggggctggaa
ttgctcaagcagcacagcggagacatcagcgtcgtcgtgctggatctgatgatgccagag
atggacggcctttctttcttgaaagccgtcggtgaactgggaaccgacgtgcccgtcatc
gtacagacggggcagggcggcatcgataccgtggtgcaggccatgcgcgcaggcgccttc
gatttcgtcgtcaagccggtctcgccggaacgtatcggcacggccattgccaacgccctg
aagctggaccagcgcgaggcgaaggcccgcacgggtcgccgctcgcgcaatcacgcggtc
ggtttcagcgatatcgtatcggcaagcccggccatgctgcgcgtcatcgaactggcgcag
cgcgcggcgcagtccaacattccggtcgttctggaaggcgaatccggtgtcggcaaggaa
atgatcgcgcgtgccatccagtcgggtggagaccgcgcgggcaagccgttcatcaccgtc
aattgcggtgccattccgcataatctggtggaaagcatcctcttcggccatgaaaagggt
gcttttaccggcgcgaccgaaaagcatgtcggcaaattcatggaggccgatggcggtacg
cttttcctggatgagatcggcgatctgccgctcgaggtgcaggtcaagctcctgcgcgcc
gtgcaacagggcgagatcgaaaccgtaggctcgaccagggtgcagaaggtcaatgtgcgg
ctgatttcggccaccaacaagaacctcatcgacgaggtgaaggaaggtcgcttccgcgaa
gacctctattatcgcctcaacgttttccccatcaccattcccgccctgcgccgccgcaag
gaagacattccctatctggcccgggtttttgccgagcgcttttcgctggagcagaagctg
ccgcatccgctcggtgtcagcgccgatgcgcttgcgctgctgacggcctatgactggccg
ggcaatattcgccagctggaaaatgccgtcttccgtgccgtggttctggctcagggcgat
gagttgacggattcggattttccgcagatcgcgcttcaggtgccggaatttgcaggcgat
ctggatgagcgcgaggcgcttcatcgcccgaccgaacgttcgcttctcgttgctccaccg
ccatcggtggaaagcagaaattccgcagccgagatcatgtcggttatggaggccatggca
agtgaggaggagcacatgcccgaaggtgttttcccgggcggcagcctcattgccagcacg
gatgaaagtggaaatgtccgcaagatcgcagaaattgaagaggaactgatccgttttgcg
ctgcgcttctaccgcgggcagatgagccaggtggcgcggaaactcggcatcgggcgctcg
acactataccgaaagttgaaggattatggcattgatcctgacgatccgctgcgcgatgcg
gcgtga
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