Agrobacterium larrymoorei: CFBP5473_14080
Help
Entry
CFBP5473_14080 CDS
T06268
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf00300
Lysine biosynthesis
alf01100
Metabolic pathways
alf01120
Microbial metabolism in diverse environments
alf01230
Biosynthesis of amino acids
Module
alf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFBP5473_14080 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alf01002
]
CFBP5473_14080 (dapE)
Enzymes [BR:
alf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CFBP5473_14080 (dapE)
Peptidases and inhibitors [BR:
alf01002
]
Metallo peptidases
Family M20
CFBP5473_14080 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QCI98921
UniProt:
A0A4D7DQI4
LinkDB
All DBs
Position
circular:2913054..2914247
Genome browser
AA seq
397 aa
AA seq
DB search
MNATDPVANLAALIRCPSVTPAEGGALTLLDTLLSPLGFAVDRVTATEDGTPDVENLYAR
LGTDGPHLMFAGHTDVVPVGDEAAWSHPPFAAEISGGEMFGRGAVDMKGGIACFVAAIAR
HIEKHGKPAGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMI
KIGRRGSLSGRIMVHGVQGHAAYPHLADNPVRGMLQLTQALMDPPFDNGTENFQPSNLEV
TTIDTGNAATNVIPAKAGAAFNIRFNDTWTVETLRAEIIRRLDEAAAHGPLRPDRTPVKY
DLVWADRPSHVFLTRNNALISSLSGAVADVTGKEPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTKIYETFIEKWFGHAAA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaccgatcccgtcgccaatcttgccgctctcattcgttgcccatcggtgacg
ccagctgagggcggtgcattgacattgctcgatacgctgctttcgccgctcggcttcgca
gtggatcgcgtgacggcgacggaggacgggacgccggacgtggagaacctctacgcccgg
cttggcaccgatggtccgcatctgatgtttgcgggccatacggatgtggtgccggttggc
gacgaagctgcgtggagccatccgccttttgctgccgagatttcgggcggcgagatgttc
ggtcgcggtgcggtggacatgaagggcggcatcgcctgcttcgttgcagccattgcccgc
cacatcgaaaagcacggcaagcctgcgggctccgtgtccttcctcatcaccggcgacgag
gaaggcccctctatcaacggcacctccaagctgctggaatgggccgccgcgaagggtgag
acctgggatgcctgcgtcgtgggcgaaccgacaaaccccgaccagctgggtgacatgatc
aagatcggccgtcgcggctcgctctccggtcgcatcatggttcacggcgttcagggccac
gcggcctatccgcatctggcggataatcccgttcgtggcatgctgcaattgacgcaggca
ctgatggacccgcctttcgataacggcaccgaaaacttccagccgtcaaatctggaagtc
acgaccatcgatacgggcaatgccgcaacgaacgtcatcccggccaaggcaggcgctgcc
ttcaacatccgcttcaacgatacgtggactgtcgaaacgctacgcgccgagatcatccgc
cgtctggatgaggccgcagcccacggcccgcttcgcccggatcgcacacctgtcaaatac
gacctcgtctgggcagaccgcccgagccatgtttttctcacccgcaacaatgcgctgatc
tcctcgctttcgggcgctgtcgcagacgttaccggcaaggaaccgaagctttcgacgacc
ggcggcacttccgacgcccgcttcatcaaggattactgccccgtggtggaattcggcctc
gtcggccagaccatgcatatggtggatgaacgcgtggccgttgccgatctggaaacgctg
acgaaaatctacgaaaccttcatcgaaaaatggttcggccatgccgccgcgtag
DBGET
integrated database retrieval system
