Austrofundulus limnaeus (annual killifish): 106511150
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Entry
106511150 CDS
T06063
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106511150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106511150
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106511150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
106511150
NCBI-ProteinID:
XP_013855349
UniProt:
A0A2I4AIP1
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MATDVGSPQRFFHMPRFQHQAPRQVFYKRPDTAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPLGMLNNPMNAVTTKFIRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAVREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWN
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDVEPNSMALIPGMGIPEQLKAAMEQEQNSKETPPEMEMSIPGLDWGMDE
VMGKDAKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPQSGDLNKDRTMDLKGDMKKKTQA
ELEQEMAALQYTNPQLLEQMKINQMNSDGNLGPPQGPGSMPPFPGPGGPGPPGPQGFPNM
ASQQMSNNMGPPMGPGGMQPSFMHPGQMGPPSGPPLHQGPPQGMMGSSDMQEPQRHPGPP
RNLGPQGPHGMGPRGMQGPRGMQGPPSGMMGPPPRGMGPRDPQGPPPQGGMVPPQGNMMG
PQGPMQGGMMGPPPRTHNNMPNNYGPGNMQGPPGGMHGPPGNMQGPPGNMQGPPYMQHQG
QNSGPMMHGMGPQGPNSKDLRGPPSNHHMGPPDRQGPAGSDQGSSSYWGDNQQGRRGPQD
FDGGQDFHNRGEDGWRPGPGPGPGPGFQGGGHRGGHRGGGGNWGPDERYNAGDFRGRRED
RFRGGGPPRPGGRSYPDEYGGQEEGFDGAEEMGHGWDTGGRGRPQRGGGLPRGGHDSYRD
DGSSPGGRERPSSLQGMDMASLPPRKRPWQDGPGTGGDPRERESPGADGGRLPQREDGGY
PPPGRGGRGGWGPGGGPGPGPWRGGPPRGAPRGGGRGR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagacgtgggctcaccgcagcggttcttccacatgcctcgtttccagcaccag
gctccacgtcaggtgttctacaagaggccggacacggctcagcagcaggccatgcagcag
ctcaccttcgatgggaagcgcatgaggaaggccgtaaaccgcaagaccatcgattacaac
ccctctgtcatcagatacctggagaaccgtctgtggcagagggaccacagagacttcaga
gccatccagcctgacgcaggctgttataacgatcttgttcctcctctgggaatgctgaac
aaccccatgaatgctgtcaccacaaagtttatcagaacttcaaccaataaagtcaagtgt
cctgtgttcgtcatcaggtggacacctgaaggacgccggctggtcactggagcctccagc
ggagagttcactctctggaacggactcacctttaactttgagaccattctgcaggcccac
gacagtccggtccgggcaatgacctggtctcataacgacatgtggatgctgactgcggac
cacggcggctacgtgaagtactggcagtccaacatgaacaacgtgaagatgttccaggct
cacaaggaggccgttagagaagccagcttctctccaactgataacaagtttgccacctgc
tcagatgatgggaccgtccggatctgggactttctacgctgccacgaggagaggatcctc
agaggtcatggtgctgatgtgaagtgtgtcgactggcatccaaccaaaggtctggtggtg
tcaggcagcaaagacagccagcagcccatcaagttctgggacccaaagaccggacagagt
ctggccacgctccacgcccacaagaacaccgtgatggaggtgaagtggaacctgaacggg
aactggctgctgacggcgtcacgggaccacctctgcaaactgtttgacatccggaacctg
aaagaagagctgcaggtgttcagaggacataagaaggaggccacagctgttgcttggcat
cctgtccacgagggtctgtttgccagtggaggttctgacggatcactgctgttctggaac
gttggtgtggagaaggaggtggggggcatggagatggcccatgaggggatgatctggagt
ctggcctggcacccgctcggtcacatcttgtgttctggttccaatgaccacaccagtaaa
ttctggaccaggaatcgacctggagacaagatgagggatcgttacaacctgaacctgcta
cctggcatgtcagaggacggtgtggagtacgacgatgtagagccaaacagcatggccttg
attccagggatgggaatccctgagcagctgaaggccgccatggagcaggaacagaacagt
aaagaaacacctccagagatggagatgtccatccctggactggactggggaatggacgag
gtgatgggcaaagacgccaagaaggttccccagaagaaggtcccttacgccaaaccaatc
ccagctcagttccagcaggcctgggccgagaacaaagttcccatgatgcctcagtctgga
gacctgaacaaagacagaaccatggatctgaagggagacatgaagaagaaaacacaggct
gagctggagcaggagatggcagcgctgcagtacaccaaccctcagctgctggagcagatg
aagataaaccagatgaactcagacgggaacttgggacccccacagggaccaggctccatg
cctccgttcccgggccccggtggtcctggtcctcctggtccacagggatttcctaacatg
gcttctcagcagatgtccaacaacatggggccccctatgggtcctggggggatgcagcca
tctttcatgcaccctggacagatggggcccccctctggacccccacttcatcagggcccc
cctcagggcatgatgggatcatcagacatgcaagaaccacagagacatcctggcccccca
cgaaacctgggccctcaggggcctcatggtatgggacccagagggatgcagggacccaga
gggatgcaaggcccccctagtgggatgatgggcccccctccccgaggaatgggcccaagg
gaccctcaaggacccccacctcaaggaggaatggtgcctcctcaaggaaacatgatgggg
ccccagggcccgatgcagggtgggatgatggggcccccaccaaggacacacaacaacatg
cccaacaactatgggccaggcaacatgcaggggccccctggaggaatgcacgggccccct
gggaacatgcagggaccccctgggaacatgcaggggccaccgtacatgcagcaccagggt
cagaactcggggccgatgatgcatgggatgggtccacagggacccaacagcaaagacctt
cggggaccaccgtccaaccaccacatgggtcctcctgatcgccaaggtcctgcagggtct
gaccagggttccagctcctactggggagacaaccagcaaggccggcggggcccgcaagac
ttcgatggaggacaagacttccataaccgaggagaagatggctggagaccaggaccagga
ccaggacccggtcctggattccaagggggaggccacagaggaggccacagagggggcgga
ggaaactggggtcctgacgagcgatacaatgcaggagacttcagaggacggagggaggac
aggtttcgagggggcggacctcctcgacctggagggcggagctaccctgacgagtacgga
ggccaggaggaaggctttgatggtgcagaggaaatgggccatggctgggacactgggggc
cgcgggaggccgcaaagaggaggaggactaccaagaggaggtcatgacagttaccgggac
gacggctcgtctccaggtggacgtgagcgtccctcgtctctgcagggtatggacatggcg
tctctgccacccaggaagcgtccgtggcaggatggaccaggaacaggaggagaccccaga
gagcgagagtcccctggagctgacggaggtcgtctacctcagagggaggatggaggttac
cctcctcctgggcgaggtgggcggggcggctggggtcctggaggaggtccggggcctggt
ccgtggcgaggaggaccacccagaggagcgcccagaggtggtgggcgtggccggtag
DBGET
integrated database retrieval system
