Austrofundulus limnaeus (annual killifish): 106515523
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Entry
106515523 CDS
T06063
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
Organism
alim
Austrofundulus limnaeus (annual killifish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
106515523
NCBI-ProteinID:
XP_013860816
UniProt:
A0A2I4AZA3
LinkDB
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Position
Unknown
AA seq
654 aa
AA seq
DB search
MLGDFESIPIPQGPPGIRGPQGPKGKDGLDGIPGPPGQKGEPGVRGPPGIPGFEGLKGAE
GQKGDKGDPGQKGQAGRDGLSLPGLPGPPGPPGPVTNLRDMLLNSTDGAFNFSGIFEAQG
FAGPQGPKGDIGLPGLQGPQGLKGEKGEPASVIAADGSLMFDMAGSTMPKGIKGDRGVTG
PPGITGPIGPPGIKGEIGIPGRPGRSGLIGPKGEKGDPQGRPGPPGPPGPPGRPGVFNCP
KGTVFPIPPRPHCKLPPNSGGTIATGYCQQGPKGEKGDTGPPGLPAPPSTYLSKGTWGDK
GSKGEKGEKGDAGYPGQPGFPGRSGLVGPKGESVLGPPGQPGMPGPPGNPGYGRPGSVGP
PGPPGPPGTPGFLSGYGSALSIAGPPGPPGPPGSPGASSNSATLKTFSTRESMMQQTLRV
EEGTLAYVRATGSLFLKVSQGWKEIQLGNLIYLSSNILQQDEPQAANQVRGQAVQRIRSI
KQRLNLVALNQPHSGNMLGLNRADRMCYEQAKAMGLAPNYRAFISTNRQDLKNVVYPAFR
ENLPVTNLRGDVLFLNWRSIFRGDSGTINTRIPIFSFDGRDVSADSFWPRKSIWHGSGNR
GVRLLDKHCETWQADDISVMGQSSSLTSGLLLGQETRSCSNEYIVLCIETHKTY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtgattttgagtccatccctattccacagggccctccaggaatccgtggacct
caaggacccaagggtaaagatggtttagatggcatcccaggaccaccgggccaaaagggg
gagccaggtgttagaggaccaccagggattcctgggtttgaaggactaaaaggagcagag
ggtcaaaaaggggacaaaggtgatccaggacaaaagggacaagccggacgagatgggctc
agtctgcctggtcttccaggaccacctggaccaccgggtcctgttaccaaccttcgggat
atgctgcttaatagtacagatggtgctttcaacttctcagggatatttgaagctcaggga
tttgctggaccacagggtccaaagggggacatcgggttgccaggtttacaaggacctcaa
ggactgaaaggtgaaaagggtgagccagcttctgtcatcgcagcagatggttccttaatg
tttgacatggctgggtccaccatgcccaaaggaattaagggagataggggtgttaccgga
ccacctggaattacaggaccaattggaccaccaggaatcaaaggagaaattggcatccct
ggacgacccggccgttcgggtctgataggacctaaaggagagaaaggggaccctcaaggc
cgtccaggacctcctggacctcctggacccccaggtcgcccaggagttttcaactgcccc
aaaggaacagtgttccccatccctcccagaccccactgcaaactgccccccaactctgga
ggaacaattgcaacaggttactgccagcaaggaccaaaaggagaaaagggggacacgggt
cccccaggattaccagctcctccaagcacatatctctcaaaaggaacctggggtgacaaa
ggcagcaaaggagagaagggagaaaagggggacgcagggtatccaggtcagccaggtttt
cctgggagatcaggacttgtgggccccaaaggagagtctgttcttgggcctcctggtcaa
ccagggatgccaggcccacctgggaatccaggctatggtagaccaggttctgttggtcct
cctgggccaccgggtcctccagggacacctgggttcctctctggatatggttcagctctg
agcattgctggcccccctggtccacctggaccacctgggtctccaggtgcttccagtaac
tcagcaactttgaaaactttttccactcgggagagtatgatgcagcaaaccttgagggtt
gaagagggaacactggcatacgtcagagcaacaggaagtctcttcctgaaggtttctcag
gggtggaaagaaatacagcttgggaatctgatttatctctccagtaacattttacaacaa
gatgagcctcaagctgcaaaccaagtcagaggacaggcggtgcaaagaatacgttcaata
aaacaaagactgaacctggtggccttaaatcagccacattcaggaaacatgttggggctc
aacagagctgacaggatgtgttacgagcaggccaaggccatgggtttggctcccaactat
cgcgccttcatttcaaccaacaggcaagacctgaagaatgtcgtctaccctgcttttcga
gaaaatctgccagttaccaatttaaggggggatgtgctgtttttaaactggcgatcgata
ttcagaggtgacagcgggacaatcaacaccaggatacctatcttctccttcgatggccga
gatgtttcagctgattccttttggcctaggaaaagcatctggcacggttcaggtaacaga
ggcgtcaggctcttggacaaacactgcgagacgtggcaggcagacgacatctctgtcatg
ggccagtcgtccagtctgacctcaggtctgctcctgggtcaggagacacgaagctgctcc
aacgaatacatcgttctttgtattgagacccataaaacgtattaa
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