Austrofundulus limnaeus (annual killifish): 106519486
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Entry
106519486 CDS
T06063
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
PA14
Motif
Other DBs
NCBI-GeneID:
106519486
NCBI-ProteinID:
XP_013866641
UniProt:
A0A2I4BFX7
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search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NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaccatgctgttgcttcctgtctgtgtgctactgatgcttggggcgcgtgct
cttgctggaggctatgctcccgtaccccacatgaagtacatgcagcctatgatgaaagga
cccattggaccaccatttcgagaaggcaagggacattatgttgatatgccacccatgatg
aagggggaaactggccctcaaggaaaacctggaccaagaggcccccctgggccaccagga
cttccaggaaaacccggactgggaaatccaggtctcaatggacagcctggccctcagggg
cctcctggtttaacaggaattggtaagcctggacttccaggtctgcctggaaagattgga
ccaaaagggtttccaggaattaatggcgaaattgggcctcgtggtgagccaggttcccgt
ggacctcctgggccccctggcatccctggtccagctggtctgtctctaaatggaaagcct
ggactcccaggtatcagaggtccccccgggactcgtggtgagccaggaataaaaggcctt
cctggcccaccaggtgaacgtggacttaaaggtgaaaatggaaatggaaaaccagggccc
acgggtttaaggggtcctccaggtttgaaaggcagtacggggccacctggtttatcaggc
attggcaaaccaggaccaaaaggtttgcctggactgcctggatttaaaggtgatcaagga
cttccaggagatctaggagaaccaggagaaccagggccaccaggtttacaaggtctgcca
gggccagttgggataggaaaacctggtcttgatggacttccaggattaccaggtccagtg
ggtccaaaaggtgaatcaggggtccggggaaatcctggcatgcctgggacaccaggctat
ggaaaacctggtctaattggacctaaaggagaaaaaggtcacggtggacttcctggtctt
ccgggagacaaaggggaaaagggattgatgggtccaggtgggcaaccaggtcttgatgga
ttaccaggaccgacaggtattcaagggccaaaagggctcccaggaaaccatggaattcct
gggctgaaaggagacataggaccccagggccccccaggattgcctggacttagaggtgac
caaggccccaatgggatccctggtaaatctggaatcccaggtgaaaaaggcatccctgga
cctaatggtcctattggaaaacctggtcccaaaggtgagccaggactaattggccaacct
ggtaatccagggctgacaggtggtccagggcctaaaggagaggctggattcatggggacc
ccaggccccaggggccagtcaggcattcctggtctccaggggcctatgggtccaatgggc
ccacagggtgtccctggaacaaggggtgaacctggacttccagggcctccagggctgggg
aagtttggcgaaaagggaggaatgggtccccaaggtcctccagggaaaccaggccctgct
gggcttaacggtcaccctggcttgcctggtcctccaggtcctcctggtcctccgggaaat
ggtcaaactgttgttgcagggcccacggatacagggttgggtggggaggaaataccaggc
aggaaggggcctgcgttcactcaagttccactctctgcgtctttagcacccgccttcacg
gccattctctccactccgttccctccctccagcatgccaatcaaattcgacaggactctg
tataatggacaaaatgcctacagcacctcyactggcatgttcaccgctccggtatccggt
gtctactactttgcttaccacatgcatgtaaagggaaccagcttgtgggtggctttgtac
aagaacaatgtaccagccacttatacttatgacgaatacaagaaaggctatatggaccaa
gcatctggtagtgctgtcctagagcttaaggaaggcgatgaagtatgggtccaaatgcct
tcagatcaagcaaacggcctttattctaccgagtacatccactcctcyttttcagggttc
ctgctctgtcccacataa
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