Austrofundulus limnaeus (annual killifish): 106524480
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Entry
106524480 CDS
T06063
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
SOUL
Motif
Other DBs
NCBI-GeneID:
106524480
NCBI-ProteinID:
XP_013873747
UniProt:
A0A2I4C167
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MDRSTGGKTLSSDGGAAGSSSVVTKSVTTSGFISQSGSGGSAGPGGSEATGGGSGVSSSS
VLITSSRSLQSGSGSKTSGSVSITSGSSSGGVFVSSGASGAAGGSTESGRGPSGMSYSFG
SSGKEGKRDGGLGAVTVSRVTKTSSTSGGSETKRGSSLSSPYSPPSKERKSLTTMAAALS
EVFDESSSTNSSPEYNRKEYGGSSVISSSVTRGRTHSRESEIRARLQSASPPARWTELDD
VKRLLRGNRSTSTSVSPTQSPNNTLPIPRKASVETRAAPEAPAEPYGSVWHGDVGSGYGY
NTNPNNYSTTSTLYQPGVQNNRTLGSPAMNSGLSASGSAPVYGVQNNLTGPTVLAPTGPS
AQIVYGVQKNVSGLSPTTVRPSSPTNYEASGKDFNFVLIEKENAPIKKETERLVMAKDSG
KQFVSAAPFTGTYSEDSLKREKQKLSSSEEGTDVKSSSLKAGTKDKATYAEIRKDESGFG
FCSCCTWWKWLLALLLSLLLLFGVLFGLIALGEEVRRLKDRVEALEAITGTTSARTSRLS
ASSGVNIIDPLDSEFSDXSATITRSDNSINLGAXGPGGGAGTGPGQDSTTLQRTVQQLVR
XELQSGSVRDTLVYSLKGERGPPGPKGDSGSLGPKGESGFPGLPGPPGQIGHPGPDGLRG
PKGNPGEPGPEGLPGQRGREGPMGPRGETGLPGLGEKGDKGSQGETGRPGPVGSPGPIGP
KGAAGEHGAPGTPGAPGPKGFNGEAGPSGPKGDRGAPGVPGTKGDQGERGPRGPAGEPGT
SGPQGPSGPMGSKGSAGETGSMGPPGARGPPGLPGDIGPPGSPGQQGPPGLAGNPGQPGS
KGEPGSPGKVIGPITSDTVAIPGPPGPSGPPGPAGLPGLSGPIGPAGVPGQPGPKGDSGE
KGDKGEQGQRGEPGAGPAGPPGPPGPPGQAGPQGPPGEGKQGPPGRRGPPGEPGVGDPGP
PGKKGEPGSFVPTSETFFAGPPGPPGPQGPPGDEGPQGYQGEPGQPGLPGEPGVGFPGPP
GPEGPQGPKGDPGIQGAEPGSSYIPGPPGPPGPPGPPGTEPGNVGQYIADYLQSDGIRQY
LAGPPGPPGPPGEPGSSGPSEDGLVDDVASRVIAYIQSSGSGAEPGSS
NT seq
3386 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtcgacgggaggaaagacgctcagttctgatggaggagctgcaggaagcagc
tcagttgtcacaaaatcagtaacaacgtctggatttatatcccaaagtggatcaggcggt
tcagctggaccaggtggatcagaagctacaggagggggctcgggggtctcgagcagttca
gtcctgatcacatctagcaggtcccttcagagtggatctggatctaagacctctgggagc
gtcagcatcacctcagggtcctcctcaggtggggtctttgtctcatcgggggcctcaggt
gcagcaggggggtccacagagtctggcaggggaccctcaggtatgtcctacagttttgga
agcagcggtaaagaaggaaaaagagacgggggtctcggtgccgtgaccgtctccagagtg
accaagaccagctcaacgtcaggagggtctgagacgaagagaggttcgtcgttgtcgtct
ccttattcgcctccttccaaggagaggaaaagtctgaccaccatggcagcagctctgtcg
gaggtctttgatgaaagttcgagcacaaactcctctccagagtacaacaggaaagaatat
ggtggatcaagtgtaatctcaagttctgtcactagagggagaactcacagcagagagagt
gagatcagagccaggcttcagagtgcttcacctcctgccagatggacagagttggatgac
gtgaagcgcctgctgagggggaaccgctccaccagcaccagcgtcagcccgacccagtcc
cccaacaacaccctgcccatccccaggaaggccagcgtggaaaccagggccgcaccmgag
gcccccgcagagccrtacggcagcgtttggcacggagatgtgggcagtggatatgggtac
aacaccaaccccaacaactactccacaacctccacsctttaccagccaggagttcagaac
aaccggactcttggttctcctgctatgaactctggactttctgccagcggctccgctccg
gtgtacggcgtgcagaataacctgaccggtccaacggtccttgccccgactggacccagt
gcccagatagtttatggagttcagaagaacgtctctggactgagcccgaccacagtgaga
cccagcagtcccaccaactacgaggcctcgggaaaagactttaactttgtgctgatagag
aaggaaaacgctcccatcaagaaggaaacggagcggctcgtcatggccaaagactctggg
aaacagtttgtgtccgccgcacctttcacaggaacttactcagaggactcactgaagagg
gaaaaacagaaactttcatcgtctgaggaaggaactgatgtaaaatcttcgagcctgaaa
gctgggactaaagacaaagcgacgtacgcagagatccgtaaagacgagtctggttttggg
ttctgctcctgctgcacctggtggaagtggctcctggccctcctgctcagcctgctgctc
ctcttcggtgtcctcttcggactcatcgctttgggtgaggaggtgagacgcctgaaggac
cgcgttgaggccctggaggccatcactgggaccacatccgcaaggaccagccgtctgtcg
gcctcctccggcgtcaacattatcgacccgttggactcggagttcagcgacyggagcgcc
accatcactcgctcagataattccatcaacctaggagctgytggtccaggaggaggtgca
gggactgggccgggtcaggacagcaccaccctgcagagaactgtccagcaactggtcagg
rctgaactccagtccggttctgttcgagatacactggtttattctctgaaaggcgagagg
ggaccaccgggtccaaaaggtgattctggatcacttggaccaaaaggtgagagtggattc
cccgggctgccaggtcctcctgggcagattggacaccctggaccagatgggttgagggga
ccgaagggaaatccaggtgaaccaggtccagagggtctgccaggtcagaggggccgggag
ggaccaatgggtcctcgaggagaaactggacttcctggtttaggagagaagggagataaa
ggatctcaaggtgagacaggacgtcctggtcctgttggttctcctggaccaataggtcca
aaaggtgctgcaggagagcacggagctccaggaacccctggtgctcctggtccaaagggt
ttcaatggtgaagctggaccctcaggaccaaaaggtgaccgaggagctccaggggtgcca
ggaaccaaaggggatcaaggagaaagaggaccacgtggaccagcaggtgaacctggaaca
tctggaccacaaggcccatcaggaccaatggggtcaaaaggaagtgcaggtgaaacgggc
tccatgggacctcctggtgctagaggaccaccaggacttcctggtgatattggtcctcca
ggttctccggggcagcagggacctccaggactcgcaggaaacccaggacagcctggcagc
aaaggtgaaccaggatcacctgggaaagtcatcggtccaattacttctgatactgtggcc
atccctggacctccaggaccatctgggcctccgggtcctgcaggacttcctggtttatct
ggtcccattggtcctgctggtgttccaggacaaccaggtccaaaaggagattctggggag
aaaggagataaaggagagcaaggtcaacgtggtgaaccaggagccggacctgcaggtcca
ccaggaccaccaggtcctccaggacaagctggtcctcagggtcctcctggtgaaggtaaa
caaggtcctccaggccgtagaggaccacctggagagccaggtgttggtgaccctggacct
ccagggaagaagggagagcccggcagctttgtgcccacatcagaaaccttctttgccgga
ccaccaggacctccaggcccacagggtccaccaggtgacgaaggacctcaaggctaccaa
ggagagccgggacagcctggtcttccaggagaaccaggagttggtttccctggacctcct
ggtccagagggaccacaaggacctaaaggagatcctggaatccagggagctgagcctggt
agctcatatattccaggcccacctggtccaccaggcccacctggtccacctggaactgaa
ccgggcaatgtgggccagtacatagcagactatcttcagagtgatggcatcagacagtac
ctggctgggcctcctgggcctcctggacctccaggggaaccaggatcttctggtccatca
gaagatggacttgtggatgatgttgccagcagagtcatcgcctacattcagagttcaggt
tcaggagctgagcctggtagctcata
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