KEGG   Austrofundulus limnaeus (annual killifish): 106524504
Entry
106524504         CDS       T06063                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106524504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alim03019]
    106524504
   03041 Spliceosome [BR:alim03041]
    106524504
Messenger RNA biogenesis [BR:alim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106524504
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106524504
Spliceosome [BR:alim03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    106524504
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 106524504
NCBI-ProteinID: XP_013873785
UniProt: A0A2I4C1A9
LinkDB
Position
Unknown
AA seq 359 aa
MSKDVSIVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGGLTDCVVMRDPNSKRSRGFG
FVTYSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEE
SHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDAVDRIVSKFQKYHTINSHNCE
VRKALTKQEMQSVGMGMRGSRSSGGRPYDYDRGFNQGGRGGGGGGGRYGDGPYNCNNGGD
GGGYGGGPGGPGGYNQGXNRGYNQGYNQGGGGGGGGGGGYGGNGYDSNGYGGNCGGGGGG
GGNNYNNMGHYDSQASNFGPMKNNFGGGGGGGSGGGRNFGGGYGGGSNNPGSYGRPGRF
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtcgaaggacgtaagtattgtaccacgtgagccggagcagctccgtaagcttttcatc
ggaggcctgagcttcgagacaacagacgaaagcctgcgtgctcattttgaacaatggggt
ggtctaacagattgcgtggttatgagggatcccaacagcaagcgatccaggggttttggc
tttgtgacatattcatcagtacaagaagttgatgctgccatgtctgcccgtcctcataag
gtggatgggagagtggtggagcccaaaagagccgtttctagagaggactcaaaccgcccc
ggtgctcacataaccgtgaagaagatttttgttgggggcatcaaagaagatacagaagaa
tctcacttgagggattacttccagcaatttggtaaaattgaggtcattgacatcatgacg
gatcgtaacactggaaagaagaggggctttgcttttgtcacgtttgatgaccatgatgct
gtcgataggattgtcagtaagttccagaaataccacacgatcaactctcacaactgtgaa
gtgagaaaggcactcaccaaacaggaaatgcaaagtgtaggaatgggaatgagaggaagc
aggagcagtgggggaaggccatatgattacgacagaggctttaatcaaggtggaagaggt
ggaggagggggaggaggacgatacggagatggtccctataattgcaataatggtggtgat
ggtggtggttatggaggtggtcctggtggtcctggtggctacaaccaaggcrgcaaccgt
ggttataaccagggttacaatcagggcggtggtggaggaggaggcggcggcggcggctat
ggaggaaatggttacgacagcaatggttatggtggcaactgcggtggtggtggaggcggc
ggtggcaacaactataacaacatgggccattacgactcccaggcttctaactttggtcca
atgaagaataacttcggtggtggtggcggaggcggcagcggtggtggcaggaactttggt
ggtggctacggaggaggctcaaacaatcctggtagttatggccgtccaggacgattttag

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