Austrofundulus limnaeus (annual killifish): 106524944
Help
Entry
106524944 CDS
T06063
Symbol
rbm27
Name
(RefSeq) RNA-binding protein 27
KO
K13193
RNA-binding protein 27
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106524944 (rbm27)
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106524944 (rbm27)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ_5
PDZ
PWI
RRM_1
Nup35_RRM_2
PDZ_6
Nup35_RRM
zf-CCCH
PDZ_2
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
106524944
NCBI-ProteinID:
XP_013874447
UniProt:
A0A2I4C387
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MIIENVEALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKALCADQLDVFLQKE
TVGFVDKLFESLTTKNYLGNPAAKEPPKEEVKPPAVKTDVVETETPEEERENRRRRSPLR
NRSDFNESRSRDDRRRDDRKRRDFERHGKSSESHRERHERRRASPRGRSYSRSRSRSGSR
GKSRDREHRGGREFKSKFEVERKDTNSYNASVIPGSQPXPPPPQHPPLLLPLPTAPHPFP
PSSSSGVSGAGGVPVATPAHLPDSTTDSWSSYFGAQRQDGVGKPFSNKSVSLKQRCRDYD
EKGFCVRGDLCPFDHGNDPLIVDDVNLPNIIPFPPPPVMPPARLPMPPITEPPPSLRIPS
MPPYGQPPPPGVFPMTGPPLIATSGIDTPNHQSTITSSPPLGPPGVGLPPTLPPPPPPPP
PPQPPSSSSSVSLRPQYVQSEYTYDPEGYNPESPGLTAAARNSYRQFIPRVQTQRSNLVG
LKSGDGQVSRAANIVIQTEPSAASSSPGNNVSRFNSEQDSRKRTLGPVTAEGPAVKKPWM
EKPSFTNQDKMSVFPKRNHYVNTKLEVRKIPRDLNNITKLNEHFSKFGTXVNIQVVFGGD
PEAALIQYTNNEEARRAISSIEAVLNNRFIRVHWHRELSTTTTGPPEQSSGVQLAGLAPN
QGLQHGNMHKGIKQHNPAAYVLNKTVPKHHLNTTKTDALNPNSDAVNVAPNTQKIPYSST
AHKSSSKSLGKTGKALEAQEALKKKQEALKLQQDMRKKKQEMLKAQIECQKVLINRLEKN
RSMKPEERANIMKTLKELTEKITQLQNEMNPAPQAPSGKTSHSQPKTKTDAQKELLDAEL
DFHKKMSSGEDTTDLKRKLGQLQVEATRLGLIRPPAGRGRGRGKMAPESGAIHGGRGRSR
SREMGSRGGLVNRMVVDHRPRALAILGVTQEEKEELMPHFVKFGEIEELRDQDANSVIMT
FKTRSEAENAANQGAKFKGRVLQISWYKPKTASVTTEPEEEVTKDEDNTKEASSYLPGEE
ERGEDEEEEEDDDEEGSRKEDYSEGDLVDVSAYSGPGEEEDSAGSQLDDEDDEEDEEPYQ
PESSCSEIPGLPNEEEPVPPSRKIRFSTEPIKVFTTYSNEDYDRSNSDVDPMAASAEYEL
EKRVEKLELFPVELEKDSDGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAQRDGRIQM
NDLIVEVDGTSLVGVTQSFAASVLRNTSGKVRFMIGREKPGEQSEVAQLIQQTLEQERWQ
REMMDQRYKQYMDDDEETGDYATDEEDEMSPVFPNSIEVFDLAENQDLSPVELDPEKLAH
KYKELQIKHAVTQAEIQLLKRKVSSLYFQPFSTHKDENPSVLLAFISDDLMLPLPPTSRL
LPPTMTPSPPAGSCRAG
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagaaaatgtcgaagctctgaagtcgtggctggcaaaactcctggagccaata
tgtgatgctgacccctctgcactggccaactatgtggtggctcttgtcaagaaggacaaa
ccggagaaggagctgaaagctctttgtgccgatcagcttgatgtcttcctacaaaaggaa
accgttggatttgtcgataagctttttgaatcgctgacaacaaagaactacctgggaaat
cctgctgccaaggaacctccaaaggaagaggttaaaccacctgcagtcaaaactgatgtc
gttgagactgaaactccagaggaggaaagagaaaacaggcgcaggagaagccccctgaga
aaccgctctgactttaacgaatccaggagccgcgatgacaggaggcgggacgaccgcaag
cggcgtgacttcgagcggcacgggaagagcagcgaatcccatcgcgagcgccacgagcgt
cgcagggccagcccccgcgggcggagctacagcaggagcaggagcaggagtggcagccga
ggaaagagcagggaccgggagcacagagggggccgagagttcaagtcaaagtttgaggtg
gagagaaaagacacaaacagctacaacgcttctgttatacccggctctcagccgcrgccg
ccgccgccgcagcacccaccgcttctcctgccccttcccacagctccacacccgttcccc
ccgtcctcgtccagtggagtctctggagctggaggggttcctgtggcgacacccgctcac
ctgcccgacagcactaccgacagctggtcgagctacttcggcgctcagaggcaagatggc
gtcggcaagcccttcagcaacaagagcgtctccctgaagcagcgctgcagggattacgac
gagaaaggattttgtgtccgcggcgacctttgtcctttcgaccatggcaatgatcccctc
atcgtcgatgacgtcaacctcccgaatataattccgttcccaccccctcctgtaatgcct
cccgccaggttacccatgcctccgatcaccgagccgcccccgtccctcaggattccatcc
atgccaccctatggccagccaccgccaccaggcgtcttcccaatgacaggacccccactg
atagcaaccagtgggatcgatacccccaaccaccaatccacaatcacttcttctcctcct
ctcggaccaccaggcgtggggttgccycctactcttccycctcctcctcctcctcctcct
cctcctcagcctccttcttcatcctcatctgtgtctcttcgccctcaatatgtccagtct
gaatatacgtatgacccagaaggctacaacccagaatctccaggactgactgcagcagct
cgtaattcgtatcgtcagttcattcctcgcgtgcagacccaacgctccaacctcgttggc
ctgaagtcaggggacggacaagtgtccagagctgccaatattgtgatccagacagaacct
tcagctgcctccagcagtcctggaaataacgtgtcacgtttcaactctgagcaggacagc
aggaagagaacactgggacccgtgacagctgagggacctgcagttaaaaagccctggatg
gagaaacccagctttaccaaccaagataagatgagtgtttttccaaagagaaatcactac
gtgaacaccaagctggaggtgcgcaagatcccacgggacctcaacaacatcaccaaactc
aacgagcacttcagcaagtttggaaccatrgtcaacatacaggttgtgtttggtggcgac
ccagaggcggcattgatccagtacacgaayaacgaggaagccagacgggctatatccagc
atcgaggccgtcctcaacaaccgcttcatccgcgtgcactggcaccgcgagctcagcacc
accaccacaggtcctccggagcagagctcaggggtccagctggccgggttggcccccaac
cagggactgcagcacggcaacatgcataaggggatcaagcagcacaatccagccgcctac
gtgttgaacaagactgtacccaaacatcacctaaatacaacaaagacagatgcactgaat
ccaaactcagacgcagttaatgtggcgcctaacacccagaagatcccttactcttccaca
gcccacaagtcctcctcgaagagccttgggaaaacaggaaaagcactggaagctcaggaa
gctttaaagaagaagcaggaggcattaaaactccaacaggacatgaggaagaagaagcaa
gagatgctgaaggcacaaatcgagtgtcagaaggtactgatcaaccgtcttgagaagaat
cgcagtatgaagcctgaggagagggccaacatcatgaaaaccctgaaggagctaacagag
aagatcacccagctgcagaatgaaatgaaccctgccccgcaggcccccagtggtaaaacc
agccacagccagcccaaaaccaagactgatgctcagaaggagttgcttgacgctgagctc
gactttcacaagaagatgagctctggagaggacacaacagacctcaagaggaaactgggg
cagctgcaagtagaggcgacacggctgggtctgattcgacctccggctggacgaggccga
ggccgggggaaaatggcaccggaatccggcgcgatacacgggggccgaggcaggagccga
agccgggaaatggggtcccgtggtgggcttgtgaaccgaatggtggtggaccacagaccc
agagccctcgctattttaggagtcacgcaggaagagaaggaagaactaatgccacatttt
gtgaaatttggtgaaatcgaagaacttcgtgaccaagatgccaacagcgtcatcatgacc
tttaaaacacgaagtgaagcagagaatgcagccaatcagggagctaagttcaaaggtcgt
gttctgcagatatcctggtacaagcccaagacggcctctgttacaactgagccagaggag
gaagtcactaaagacgaggacaatacgaaggaagcgagctcatatttgccaggagaggag
gagcggggagaggacgaggaagaggaggaggacgatgatgaggagggctcgaggaaggag
gattactcggagggagacctggtggatgtcagcgcatacagcgggcctggggaggaggag
gactctgcggggagccagctggacgatgaggacgacgaagaagacgaggagccatatcaa
ccggagagtagttgctctgaaatccccggcctccctaatgaagaggagccggtaccaccg
agcaggaaaatccgcttcagcaccgagccaatcaaagtcttcaccacctactctaacgaa
gactacgatcgaagcaacagtgacgtggaccccatggcggcctcggctgagtacgagctg
gagaagcgagtggagaaactggaactgtttcctgttgagctggaaaaagacagtgatggc
ctggggatcagtatcattggcatgggtgcaggagccgacatgggcctggagaaactggga
atcttcgttaagaccgtcactgagggtggagctgctcagagagacggcaggatccagatg
aatgatctgatcgtggaggttgatgggaccagtctggtgggtgtcactcagagttttgct
gcctctgttctccgcaacacatcgggcaaagtcaggtttatgattggtcgagaaaagccc
ggagaacagagcgaagtggctcagctgatccagcagactctggagcaggagaggtggcag
agagagatgatggatcagagatacaaacagtacatggacgatgatgaagagactggtgat
tatgcgacggatgaggaagacgagatgagtccagtgtttccaaactccattgaagttttt
gacctggcagaaaaccaggacctgtctcctgtggagctggaccctgaaaagctggcccac
aagtacaaggagctccagattaagcatgccgtaacgcaggcagaaatccagctgctaaag
aggaaggtgagctcactttattttcagcccttttctacacacaaggatgaaaatccatca
gttcttttagcttttatcagcgatgacttaatgctacctctgcctcccacgtcccgcctc
ctccctcccacaatgacaccatcacctccagctggctcatgcagagcaggataa
DBGET
integrated database retrieval system
