Austrofundulus limnaeus (annual killifish): 106531054
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Entry
106531054 CDS
T06063
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03040
Spliceosome
alim05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106531054
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106531054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106531054
Spliceosome [BR:
alim03041
]
Common components
Common spliceosomal components
SR proteins
106531054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106531054
NCBI-ProteinID:
XP_013882270
UniProt:
A0A2I4CQK2
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MSRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKEL
CSERVTVEHARSRRGGRGGGGGGGGGGGGGPSPGMGRFGGGYRRNNARYGPPVRTDYRLI
VENLSSRISWQDLKDLMRKAGEVTFVDAHRPTQNEGVVEFASRHDLKNAISKLNGTEVNG
RRLKLYEDSKRSSSRSYSRSRSRSRSRSRSRSSSRSVSRTPERRKSSGGAKPPARSMSRS
KSRSKSRSKSRSKSHSKSRSKFRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRS
KSRSPAPAPAPNNLSGSRSRSHSRSRSRSASADSKH
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgtttttattggccgcttgagcccacatgcaagagaaagagatgtggagaag
tttttcaagggatatggacggattcgagagatcaacttgaagaatgggtttggatttgtg
gaatttgatgaccacagagatgcagatgatgctgtgtatgagctgaatgggaaggaattg
tgcagtgaaagggtcactgttgaacatgctcgctccagaagaggaggaagaggaggagga
ggaggaggcggcggtggcggtggcggtggccctagtcctggaatgggacgttttggaggt
ggttatcgacgtaacaatgccagatatggccctcctgtgcgaactgactacagacttatt
gtggagaacctctcttcacggatcagctggcaggacctgaaagacctgatgaggaaagca
ggtgaagtgacctttgtggacgcacaccgacccactcaaaatgaaggggtggttgagttt
gcttcgcgccatgacctgaagaatgccatctccaagcttaatggtacagaagtgaatgga
cgcaggctgaagctctatgaggacagtaagaggagtagctcccgcagctattctcgctcc
aggagtcgctcaaggagccgcagtcgctctagaagcagctccagatctgtgagccgcacc
ccagaaaggaggaaatcatcaggaggggccaagccccctgccagatccatgtccagatcc
aagtctcgctccaaatcccgctccaagtctcgctcaaagtctcactccaaatcccgctcc
aagtttcgctccaaatcccgctcaaagtcccgttccaagtcccgctcaaagtcccgttcc
aagtcccgttccaagtcccgttccaagtcccgctcaaagtcccgttccaagtcccgctca
aagtctcgttcacctgcccctgcccctgctccaaataatttgtctggttccagatcccgt
tctcattcaagatctcgctcccgctctgcctcagctgacagtaaacactaa
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