Austrofundulus limnaeus (annual killifish): 106532318
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Entry
106532318 CDS
T06063
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180-like
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106532318
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106532318
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106532318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-Nse
FYVE
Sina_RING
DUF5527
Motif
Other DBs
NCBI-GeneID:
106532318
NCBI-ProteinID:
XP_013883802
UniProt:
A0A2I4CUY6
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MERNLLLLRCRRCRRAVLQLTPSATAADESSADVCTVWHLGVDQLPAWILTSVQQSQWTS
GKLSCCSCGARLGGFNFLNGCKCPCGQDAPVHLNKSRLDRDQRHRVPIVRPRRTRSETAP
GQSEPSGFSCPAGSSDGPPDGWDLQRRCSLDPDGSSADPRDRLRSRSGSKRQTFDSEAPT
DPGVPGVHTLSQDQDQDQDQEDMESASDPEEVLGSSVRRRFSCDGDTLLQQEQDSSQPVS
SSAAVRLKKREKNRLKSQKRKERRRQRWLQVLEDQAENGSPLDSEGAGHRDGLTCPVCLD
VFFSPYACRPCGHVFCEPCLRTLGQNRVTDTPCPLCRALIANTSFHKELDQTVKSLFPRL
YSSRKQSFQSASCSRWPLPNAKKPFGWFQEHRRGGARWRRWHLVHGGFTPGAVYLNDQGS
LTGLVLIHPSSDYWILGLKILCVLLILLFSFCLGF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaacctgctgctgctgcgctgcagacgctgccgcagagccgtcctccagctg
acgccttcagctacggctgcagatgaaagttcagctgatgtttgcaccgtttggcatctg
ggcgtggaccagctgccggcctggatcctgacctcagttcagcagtcccagtggacctct
ggtaaactgagctgctgcagctgcggcgctcgactgggaggcttcaacttcctgaatggc
tgcaagtgtccctgcggccaggacgccccggtccacctcaacaagagccgcctggatcgg
gaccagcgccaccgtgtccccatcgtccggccgaggaggaccaggtctgagactgcgcct
ggtcagagtgagcccagcgggtttagctgtccggcggggtcctcagatggaccccctgat
ggttgggaccttcagagacgctgcagtctggatcctgatggaagctctgcagaccccaga
gaccgtctgaggtccaggtccggttcaaagagacagacgtttgactcagaagctccgact
gatcctggagttcctggagttcacactttgtcccaggaccaggaccaggaccaggaccag
gaggacatggagtcagcatcagaccctgaggaggttttaggttcttctgtcagacggagg
ttcagctgtgatggagacactctgctgcagcaggaacaggactcctcgcagcctgtgagc
tcctcagctgccgtcaggctgaagaagagggagaagaaccgtctgaagagtcagaagagg
aaggagaggaggagacaaagatggttgcaggttctggaggaccaggctgaaaacggttca
ccgctggactctgagggggcggggcacagagacggcctcacctgtcccgtgtgcctggac
gtgttcttcagcccgtacgcctgccggccctgcggacacgtcttctgcgagccgtgtctc
cggacgctcggccagaaccgtgtgacggacacgccctgcccgctgtgccgcgccctcatc
gccaacaccagcttccacaaagagctcgaccagacggtaaaatctctcttcccgagactc
tactcgagccgcaaacagagcttccagagcgcgtcgtgctctcgctggcctctgcccaac
gccaagaaacccttcggttggtttcaggagcaccgacgaggcggagcgaggtggagacgc
tggcacctggtccacggagggttcacgccgggtgctgtgtacctgaacgatcagggctcg
ctgacgggcctggttctgatccacccctcctcggactactggatcctgggtctgaagatc
ctctgtgtccttttaatactgctcttttctttttgtttaggtttttga
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