Austrofundulus limnaeus (annual killifish): 106532633
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Entry
106532633 CDS
T06063
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106532633
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106532633
09142 Cell motility
04820 Cytoskeleton in muscle cells
106532633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106532633
00536 Glycosaminoglycan binding proteins [BR:
alim00536
]
106532633
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106532633
Glycosaminoglycan binding proteins [BR:
alim00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106532633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106532633
NCBI-ProteinID:
XP_013884205
UniProt:
A0A2I4CW51
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MGHPGSVGRPGPMGPKGNTGPDGPMGPKGNLGPEGKEGFDGSHGLPGIPGLQGPPGAPGH
PGCNGTDGDVGLPGVPGLPGFDGQPGVPGLSGPKGESLAPNHSKPGLPGPPGRDGNLGRP
GAPGEHGLPGNPGPRGLRGLPGHPGIPGNKGHEGTAGVPGLQGPKGRQGPTGPPGPPGRI
KDFFTESLVLKGVKGDRGDLGDKGCRGETGEPGYGFYTKGAKGDKGIPGPEGKPGKDGNF
GLAGFRGRPGSRGDPGHPGLPGGMGEKGNRGPSGPPGDVFAPESLKGYPGDPGPPGLPGL
PGHPGVVGFPGPPGPPGDTLGFSLPGPRGPPGFPGPKGDPGDSADIFSSPPGLDGDPGDQ
GPAGERGPPGPPEDRTNRITKGLPGMKGLKGLPGATGYDGIVGKKGEKGEPCYECSGLSL
PGPPGPRGPPGPPGTNPGQGEGGDPGFPGPPGLSGQPGLVGSKGLPGPPGPKGDSYSYHL
PGLKGEKGDPGYHGRPGADGFPGSPGLPGRKGAQGPPGDLHLLPGVEGDPGSPGLPGAFG
IQGPIGYPGPVGYGPPGSPGIKGDTGVPGFPGQPGIPGQKGEPSHFHIQGPPGPPGFKGL
PGLPGSPGYQGAPGTPGTPGFEGQKGERGEVSIPGRPGLPGFKGITLSIQKQIAFVLNNG
KIKIIKIHIKMSLMXHVCGCSGDKGQAGIPGIPGRGLPGQSGPEGPPGPPGEKGDGGVGY
TGPSGPPGPPGEEGAPGPEGDPGIPGFPGKPGPVGNPGPPGQKGIKGTTGPPGLPGSKEP
CQSLPGPEGPPGTDGYPGHPGPNGLPGEKGTIGLPGFGHPGLXGNPGLPGLSVQGSPGLP
GPKGRKGQNGWPGQPGPRGDSGPDGXSGHGPEGIPGNIGQPGPRGDRGPDGAKGLQGXPG
MDGEPGSRGLTGPVSIFNSTGPPGDPGAPGQPGLPGPSGDPGRTGTKGQKGNAGLSGIEG
LRGPPGEPGLDGEVLSQGTRGPAGPPGNAGPRGHSGHKGIKGDPGILGIPGANGVQGLTG
YKGAPGESSYGYGPPGPTGQKGEPGISSLIMMKGPKGEPGIEGPQGVPGNYGAKGNSGPV
GQNGPPGFQGSKGSDGSPGVKGYPGPTGLPGSPGLPGRTGTPGPKGNQGLDGIPGPPGQK
GDSGRGTGLPGRPGDPGLPGPLGNPGFPGLPVRGSHGPTGDKGLPGPPGIHGLRGQLGRE
GICVPGPKGDRGLPGNPGSRGYPGPPGAPGSTEQGLKGDRGEPGSSGNPGFCGPPGDPGP
QGPPGPIGLPGGPGARGDQGPSGKQGPPGDVGDPGYRPGLPGVLGPKGFPGPTGLKGEPT
FGRDTYEPGPPGSPGPPGYQGSPGITGPPGTRGPPGQPGLKGIPGISPPGSPGFTGHKGA
KGKAGLPGPEGRYGNPGHKGQRGLPGKGAAGYVDSFLIARHSQTIRVPDCPSGTSLIYSG
YSFLFINGNERAHGQDLGTVGSCLPRFSTMPFLFCDTERTCRYASRNDYSYWLSTDEPMP
ANMVSITADKLASYISRCSVCETTSTVMTIHSQTTQIPDCPQSWESLWTGYSFVMQTGAG
AEGSSQPLISPGSCLEIFRQVPFIECHGRGTCNYYPDSYSYWLASLNQNNMFSKPVPQTL
KGTSLQSVISRCRVCRKS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatccaggatctgtgggccgtcctgggccaatgggaccaaagggcaacactggg
cctgatggacccatgggaccaaaaggcaatctgggaccagaaggcaaagaaggatttgat
ggatctcatggccttccaggtattccaggcttacagggtcctccgggagccccaggtcat
ccaggctgcaatggaacagatggagacgttggacttcctggtgttccaggtcttcctggt
tttgatggacaaccaggtgttccaggtctgagtggacccaagggtgaatctttagcacca
aatcattccaaaccagggttaccaggaccaccaggtagagatggaaatttgggacgccca
ggtgcaccaggagagcatggattgccagggaaccctggaccaagaggattgcgtggactt
ccaggtcaccccgggattccaggaaataagggtcatgaagggacagctggtgtcccagga
cttcaaggtccgaaggggaggcaaggcccaacaggaccacctggacctccaggamggatt
aaggactttttcactgaaagtctggtattaaagggtgtaaagggagacagaggggatctg
ggagacaaaggctgcagaggtgaaacaggagaacctgggtatggtttttacacaaaagga
gcaaagggagacaaaggaataccaggtccagaaggaaagccagggaaggacggtaatttt
ggattagctggattcaggggaaggcctggctccagaggtgatccaggacatccaggacta
ccaggaggaatgggcgagaagggaaatagaggcccttctggtccaccaggagatgttttt
gcaccagagtcactcaaaggataccctggagaccctggtccaccaggtcttcctggtctc
cctgggcatccaggtgttgttggttttcctggacctcctggacctccaggcgatacatta
gggttttccttgccaggcccacgtggccctccaggcttccctggtcccaaaggagaccct
ggggattctgcagatattttcagtagtcctccaggtctagatggtgatcctggtgatcaa
gggcctgctggggaacgaggcccacctggacccccagaagacagaactaacagaattaca
aagggcctccctggaatgaaaggactgaaaggtttgcctggagcaacaggatatgatggg
attgttggaaagaaaggagagaaaggagagccttgttatgaatgtagtggattaagtctc
ccagggccaccaggtccccgcggtccacctggccctcctggcactaatccaggacaaggt
gaaggaggtgatccaggctttccaggacctccaggtttatctggacaacctggtctggtt
ggttcaaaaggcttaccaggtcctccaggaccaaagggagaytcttattcctatcacttg
cctggtttaaaaggggaaaaaggagatccggggtatcatggaagacctggtgctgatggc
ttccctgggtctcctggattaccaggtcgcaaaggtgctcaagggccacctggagatttg
catcttcttcctggagtggaaggagaccctggatctccaggtctaccaggggcttttggt
atacaaggaccgattggctaccctggaccagtgggatatggacctcctggatctcctgga
attaaaggagacactggtgtacctggcttccctggacagcctggaattccaggacaaaaa
ggagaacctagtcattttcatattcaagggcctccaggaccacctggatttaaaggtctt
cctggcttaccaggaagtccagggtatcagggagcaccaggtaccccaggaacaccaggt
tttgaagggcaaaaaggagaaagaggtgaagtgtcaattcctggacgtccagggctccca
ggttttaaaggtattacactaagcatacaaaaacagattgcttttgttttaaacaatggt
aaaataaaaataataaaaattcatattaaaatgtcattaatgtrtcatgtatgtggttgt
tcaggtgataaggggcaggcaggtattccaggtattccaggcaggggcttacctgggcaa
tctggtccagaaggccctccaggtcctcctggagagaagggtgatggtggtgtyggatat
actggcccctctggtccccctgggcctccaggtgaagaaggagctccagggccagaaggc
gatcctggaattcctggttttcctgggaaaccaggaccagttgggaacccagggcctcca
ggacaaaaaggaattaaaggtactactggccctccagggctgcctggaagcaaagagcca
tgccaaagtttacctgggccagagggaccaccagggacagatggttatcctggacatcca
ggacctaatggcttgcctggtgaaaaaggaactataggtttaccagggtttggtcatcct
ggccttyctggaaatcctggtctacctgggttatcagtacagggttcacctggacttcct
ggaccaaaaggaaggaaaggacaaaatggttggcctggtcagccaggaccaagaggagat
tctggacctgatgggatrtcagggcatggaccagagggaatacctggtaatatagggcaa
cctggtccaagaggggaccgaggccctgatggagctaaaggtctccaaggatyacctggc
atggatggagagccaggttccagaggccttacagggccagtgtccatttttaattcaact
ggaccacctggggaccccggagcaccaggacaacctggtttgcctggtcctagtggagat
cctggtagaactggaacaaaggggcagaaaggaaatgcaggattatctgggattgaaggg
ctaagaggtcctcctggtgaaccaggtcttgatggagaagtgctgtcccaaggaactcga
ggtcctgcaggacccccgggaaatgctgggcccagaggtcattcaggacataaaggaata
aaaggtgatccaggaatccttggaatacccggagcaaatggtgttcaaggtctaactggt
tacaaaggagctcctggggagtcaagctatggatatggtccacctggaccaacaggacaa
aagggtgaaccagggataagcagtttaatcatgatgaaaggtccgaaaggggaacctggt
attgagggaccacagggtgtcccaggaaactatggagccaaaggaaactcaggacctgtt
ggacaaaatggccctccaggcttccaaggttcaaaaggctcagatggatctcctggagtc
aaaggatacccaggacctactggactgccaggtagcccaggtcttccaggtagaactggg
actcctggtcctaaaggtaaccaaggtcttgatggaattcctgggcctccagggcagaaa
ggggacagtggcagaggaacaggactaccagggagacctggtgatccaggtttgccaggt
cctcttgggaaccctgggttccctggattgcctgtaagaggaagtcatggaccaacagga
gataaagggcttccaggtccacctggcatccatggtctaaggggacaactaggaagagaa
gggatttgtgttcctggacccaaaggagatcgtggattacccggcaatcctgggagcaga
ggctatcctggccctcctggtgctccaggttcaacagagcaagggctcaaaggagacaga
ggagaaccaggttcttcaggaaacccaggtttttgtgggcccccaggagatccaggccct
caaggcccacctggtccaataggcttaccaggaggcccaggagcaagaggagatcaaggc
ccttctggaaaacaagggcctccaggtgatgtgggagaccctggatacagaccaggttta
cctggtgtccttggacctaaaggttttcctggacccacaggtctcaaaggtgaaccaaca
tttggcagagatacatatgaaccaggacctcctggttcacctggtcccccaggatatcaa
ggatccccagggatcactggcccaccaggaacacggggacctccaggacaacctggtttg
aaaggcatacctggaataagcccacctggttcccctggatttactggtcacaaaggagcc
aaaggaaaagcagggctgccaggtccagaaggcagatatggaaacccaggccataagggt
cagagaggtttgcctggaaaaggtgctgcaggttacgttgacagcttcctaatagctaga
cacagtcagacaatcagggtccctgactgccccagtggcaccagccttatttattctggt
tactccttcctcttcatcaatggaaatgagagagctcacggtcaggacctcggcaccgtg
gggagctgtctccctcgtttctccaccatgccctttctgttctgtgacacggaacgtacc
tgccgctacgcttctcgtaatgactactcatactggctgtccactgatgagccgatgcct
gccaacatggtttccatcacagctgacaagctggcctcctacatcagcaggtgttcagtt
tgcgaaactacttccactgtcatgaccatccacagtcaaactactcagatacctgattgt
ccccagagctgggagtccttatggactggatactcatttgtcatgcaaacaggagctggg
gcagaaggatcctctcagcccctgatttctcctggttcatgtttggaaattttccgtcaa
gtmcccttcattgagtgtcatggcagagggacctgcaactactaccctgactcttacagt
tactggttggcctctctcaaccaaaacaacatgttcagcaaaccagttcctcagacattr
aagggaacatccttacagagtgtcatcagtcgctgtcgagtctgcagaaaatcatga
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