Austrofundulus limnaeus (annual killifish): 106533816
Help
Entry
106533816 CDS
T06063
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106533816 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
106533816 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106533816 (nfkb2)
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
106533816 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
106533816
NCBI-ProteinID:
XP_013885710
UniProt:
A0A2I4D0D5
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MAGALRMTEAHFINYDNDLQLNLMPYDYIPPVDIKTEPYIPETAHGPYVQIIEEPKQRGF
RFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGQARVEVQLVTHTDPAQVHAHSLVG
RHCNENGTCTLDIGPNDLTASFSNLGILHVTKKGVLEVLTRRLRDERKRQKGTHYHLTDT
EEVSILKEAKELGKTMDLNIVRLRFTAYLQDSDGGFTRALKPVVSNPIYDSIVLPVLSAE
SPNASNLKISRMDKTCGTVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTD
VHKQYAIVFKTPAYHSAEIERPVTVFLQLRRKKAGDSSDPKQFTYIPHLPDKEEVLRKKQ
KLLPHYESWRGGGAGGRGGGAGGFGGATGGGAGGFQFHQQMNGGAGGAGGAFYTGSFTGF
SSGGEAQMSGSAPQTDVGQQRTDGQTRSSVLQQQLLHIAASLSSRVSQSAQQTAAALLQY
CSTGDARVLLALQRHLCGIQDANGDTPLHLAIIHLQTTVMQQLVQTLLSSQQHRVLNVAN
HLQQTPLHLAVITRQPKVAELLLRAGADPSLVDKDGRSPLHLATLNGDTEMLRLLLTHLG
ERHTHLVNTSDYHGLQPLHLAVRRDGERCLRLLVEGGAKINAPEQKSGHTALHLAVRENL
FKVACMLITELKADVNACTFGGNTPLHLASSLGSPTFCAMLIAAGADKSMENDEPLFFSS
SSDEENEPTQKLTERDATSQPIKARKRPAGGHTPLDLATCLKVKNVLNNQQNPKSTRRES
KKIKASSSFEDAKSSALDEATLSRLVEVLSVGDVPWMKLAEKLGMMTLTHLYQESPTPCQ
HLLQHYKVGGGPVENLVEALQSLGLTEGVRLLRNAELQHEKHNTDATVDSGFSSQPVEEQ
EEETSMANQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctctgaggatgactgaagctcattttatcaactatgacaatgacctacag
ctcaatttgatgccgtatgactacattcctccagtggacataaagactgagccctacata
cctgagacagctcacggtccatacgttcagatcattgaagagcccaaacagaggggtttc
cgtttccgttatgagtgtgagggtccatcacacggtgggctcccaggggcctccagtgag
aagaacaggagaacctacccgaccgtcaaaattaataactatgtgggccaggcccgggta
gaggtgcagctggtgacccacaccgacccagcccaagtccatgcacacagcctggtggga
cgccactgcaatgaaaacggcacctgtacgctggacatcggcccaaacgacctcactgcc
tcgttcagtaatctgggaatcctccacgtgaccaagaaaggtgttctagaggttctgaca
agaaggctgcgagacgagaggaagagacagaaaggaacgcattatcacctgacagacact
gaagaagtgtccattctgaaggaagccaaggagctggggaagaccatggacctaaacata
gtccggctcaggttcaccgcctacctgcaggacagtgatgggggtttcaccagagccctg
aaaccagtggtttccaaccctatctacgacagcattgtcctccctgttttatctgcagag
tcacccaatgcctcaaacctgaagatctcccgcatggataagacctgtggcacggttctt
gggggagatgagatcttcctgctctgtgacaaagtccagaaagatgacattgagattcgt
ttctatgaggaggacgatgagggaggctgggaagcattcggggacttttcacccaccgat
gttcacaaacagtacgctattgtgttcaaaacaccagcctatcacagcgcagagatcgag
cggcctgtcaccgtcttcctgcagctcaggaggaagaaggcaggcgacagcagtgacccc
aaacagttcacctacattcctcacctgccagacaaagaggaggtgctccggaagaagcag
aagctgctgcctcactatgagtcctggagaggaggaggagcaggggggagaggaggagga
gcaggggggttcggaggagctacaggaggaggagctggaggctttcagttccaccagcag
atgaacggaggagcaggaggtgctggaggagctttttatacaggaagcttcacagggttt
tcctccggaggagaagctcagatgtcaggctccgcccctcagacagatgttggccagcag
aggacagatggacagacgaggagctctgtgctgcagcagcagctgcttcacatcgctgcg
tcactcagcagtcgagtgtctcagagcgcccagcagaccgccgctgcactgctgcagtac
tgcagcactggagacgcccgggtcctcctcgccctgcagagacacctgtgtggcatccag
gatgccaacggagacactccattacacctggccatcatccacctgcagaccaccgtcatg
cagcagctggtccagactctgctgagcagccagcagcaccgagtcctgaacgtggccaac
cacctgcagcagacccccctccacctggcggtgatcacgcggcagccgaaggtggcggag
ctgttgttgagggcgggggccgaccccagcctggtggacaaagatggacgcagccccctc
cacctggcgacactgaatggcgacactgagatgctgcgtctcttgttgacacacctggga
gaacgccacacccacctggtcaacacgtcagattatcacggtcttcagccgctccacctg
gctgtgaggagggacggagagcgctgtctccgcttgctggtggaaggcggagccaaaatc
aatgccccagagcagaagagtgggcacacagcacttcacctggctgtcagagaaaacctg
ttcaaggtggcctgcatgctcatcacagagctgaaggccgatgttaacgcctgcacgttt
ggaggaaacacaccactacaccttgcatccagtcttggctccccaactttctgtgccatg
ctcattgctgcaggagctgataagagtatggagaacgatgagccacttttcttcagctct
tcctctgatgaagaaaacgaaccaacacagaagctcacagagcgggacgccacctctcag
ccaatcaaagctcgtaagagacctgcaggaggacacacaccattggaccttgctacatgt
ctgaaggtgaagaatgtgttaaacaatcaacagaatccaaagtcgactcggcgagagagt
aaaaagatcaaagccagcagcagctttgaagatgccaaaagctcagcgctcgatgaagcc
acgttgtctcggctggtggaggttctaagtgtcggagacgttccctggatgaaactggct
gagaagcttggcatgatgacgctgactcacctgtaccaggaaagtccgacgccgtgccaa
cacctgctgcagcactacaaggtgggcggaggacctgttgaaaatctggttgaagctctt
cagtctctcggtttgacagaaggagtcagacttctgaggaacgctgagctacaacatgag
aaacacaacacagatgccactgttgacagcgggttcagcagccagccagttgaagagcag
gaggaggagacatctatggccaatcagtga
DBGET
integrated database retrieval system
