Austrofundulus limnaeus (annual killifish): 106534944
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Entry
106534944 CDS
T06063
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106534944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106534944
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106534944
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106534944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106534944
NCBI-ProteinID:
XP_013887219
UniProt:
A0A2I4D4T6
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MFGANRKKFMEGGLDSDYTDDSGLYYSQQSMFPPHRPDKDMLTSSSSSSTSQLSQLGASL
YGPQSALGFPIRGVNSSAAPQLSRSSLNQSASQLSSHTSTPNSGSLHTPPSPSRGILPMS
SRSVLNHNQQVGGPTGQTGGLGGGGGERGGGGGGGRSGTMGSPSRSSPSIIGMPKQPTRQ
PFSFNRNPGFNMNSSLSSNIFNGTDGSENVTGLDLSDFPALADRSRRDGSNAAPQHNPLA
GRAPYVGMVTKPSSEQTQDFSIHNEDFPALPGPNYQTKDPTSTNEDSKTNLNSSGKSSSS
SDGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGMIGLLTFIRAAETDP
GMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKL
AAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKT
NAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaacaggaagaagttcatggagggggggttggacagcgactacacagac
gactctggcctctactacagccagcagtccatgttccctcctcaccggcccgacaaagac
atgctgacgtcttcctcctcttcatcaaccagtcagctgtctcagctgggagccagtttg
tacggcccgcagagtgctctggggtttcccatccgtggggtgaacagcagcgctgctccg
cagctcagtcgaagcagcttgaaccagtctgccagtcagctgtccagtcacaccagtact
cccaactccggctcgctgcacacgcccccctcgcccagcagggggatcctgcctatgagc
agccggagcgtcctgaaccacaaccagcaggtgggcggtccaacgggtcagacgggcggg
ttaggaggaggaggaggagagagaggaggtggaggtggaggaggaaggagcggcaccatg
gggagtcccagccggtcgtctccaagcatcatcgggatgccaaaacagccgacgaggcag
ccgttctcctttaacaggaatccaggcttcaacatgaacagctcgttatccagcaacatc
tttaacggcacagacggcagcgagaacgtgacgggtttggatctgtccgacttcccggcg
ttagccgaccggagccggagggacggttccaacgcggcgccgcagcacaacccgctggcc
ggccgggcgccttacgtcggcatggtaaccaagccatccagtgagcagacgcaggacttc
tccatccataacgaggacttcccagctcttcctggccccaactaccagacaaaagacccc
accagcaccaacgaggacagcaaaacgaacctgaactcatcaggaaagagctcgtcgagc
tcagacgggccgaagtttccaggcgataagagttcggctccgagcaacaacaaccagcag
aagaaagggattcaggttcttcctgatggccgggtcaccaacatccctgtcggcatggta
acggaccagtttggaatgatcggcttgttgacgttcatccgggcggcggagacggaccct
ggcatggtccacctcgctctgggctcggacctgaccacgctgggcctcaacctcaactca
ccagaaaatctttatccgaagtttgcgtctccgtgggcatcggcgccgtgtcggccgcag
gacatcgatttccatgttccctcagagtatttaaccaacatccacatacgggacaagtta
gcagccatcaagttgtctcggtacggagaagatctgctgttttatctttactacatgaac
ggaggagacctgctacaacttctggctgctgtagaactgttcaacagggactggaggtac
cataaagaagagcgggtctggatcacccgggcccccggcatggagcccacgctgaagacc
aacgcctacgaaagagggacctactacttcttcgactgtctgaactggaggaaagtggcc
aaggagtttcatctggaatacgacaaactagaagagcgacctcatgttccctccaccttc
aactacaaccccgcccagcaggccttctga
DBGET
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