Austrofundulus limnaeus (annual killifish): 106535252
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Entry
106535252 CDS
T06063
Name
(RefSeq) collagen alpha-1(XXII) chain-like
KO
K16630
collagen type XXII alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106535252
NCBI-ProteinID:
XP_013887666
UniProt:
A0A2I4D5Z5
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MRGERGEPGPPGPPGADGSPGPAGPPGPQGLPGEHGEPGQRGRKGENGLPGVDGLPGPPG
LPGPAGPPGQTGQTGQPGLPGEMGRQGKAGEPGKSGVPGKDGLDGPPGNDGAMGPRGERG
ADGFPGKAGPKGDVGPPGPRGPPGERGESGHPGQSGSDGMRGDRGVPGEKGMDGPVGPKG
EKGDKGETGPKGPPGIPGNVAEIIPEPGEPGKPGEKGEKGEQGNPGNTGLKGLPGERGLE
GPPGPAGPKGDTGLNGETGRVGDPGPPGTPGPQGAQGLPGSVGIPGIIGPPGPAGQKGDK
GDTGKPGQSGPQGQPGEPGFTGPPGPPGKGKDGQTGEPGPPGIQGPPGAKGQPGPRGQIG
VPGDRGPPGEGKEGPPGPSGKNGEPGAVGLRGPPGLPGPQGPAGHNGLAGRPGEKGSPGE
PGKAADLSDMNLKDLCSDCPAGPPGPPGLPGLPGDKGQQGLPGKNGEDGYQGPPGPSGPT
GTPGADGAKGVKGDQGPPGSPGEKGDLGHQGPPGRPGPPGLMGAAGNDGQPGPVGPSGPA
GEKGKEGPKGIQGPPGLPGLIGQPGKMGKDGRPGEAGEPGKQGEPGPSGNPGLRGLPGFK
GHRGEPGTPGTKGEDGKPGLPGRDGKPGNEGVKGPPGPEGLVGARGEPGKPGEPGPSGKS
GLPGTPGLRGDKGEPGSIGLPGFSGPKGPAGPPGPTGPEGKQGTPGRAGERGFKGEKGDH
GIKGDKGQSGEPGMPGNPGPPGRKGHTGMMGMSGPPGEIGPPGQQGPSGNPGLPGPRGES
VSLEQMRRLIQEELVKQLDAKLVYLMSQIQPAHVKSTTGRPGPPGPPGKDGSTGRPGPPG
EPGMPGQNGGEGPRGPMGPTGEKGARGEQGDPGVGERGERGPPGPIGPAGMPGYGKDGSP
GQTGAQGEPGNPGPHGQPGPPGPAGQCDPTQCAYYASLAQRPHTKNVKGT
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtgagaggggagaacctggacctccagggcctccaggagcagacggttcccca
gggcccgctggtcctcctggtccacaaggcctacctggagaacatggagaaccgggccaa
aggggaaggaaaggtgaaaatggactgcctggtgttgatggcttacctggacctccgggt
ctaccaggtccagcaggtccaccagggcaaacaggacaaactggacaacctggcctgcct
ggtgaaatgggaaggcaggggaaagcaggagaaccaggaaagtctggtgttcctggaaaa
gatggcttagatggacctcctggaaatgacggtgccatggggcccaggggggaacgtgga
gcagatggttttcctggaaaagcaggacccaagggtgacgtagggcctcctggaccaaga
ggtcctccaggagaaagaggagagtctggtcaccctgggcagtctggctctgacggtatg
agaggagatcgaggtgttccgggggaaaaaggaatggatggaccagttggaccaaaaggt
gaaaagggtgataagggtgaaactggacckaagggaccacctgggattccaggaaatgtt
gcagagatcatcccagagcctggagaaccagggaaacctggagagaagggagaaaaggga
gagcaaggaaatccaggaaacacgggtctaaaagggttacccggtgaacgaggtttggaa
ggacctccaggaccagctggtccaaagggagacacaggtcttaacggggagacaggacgg
gttggagatcccggtccaccaggaactccaggtcctcagggagcccaaggtttaccagga
agtgtgggtataccagggatcattgggcctcctggtccagctggacagaaaggagacaag
ggtgacacagggaaaccaggacagtcaggcccacaaggtcaaccaggagagcctggtttc
accggccctcctggaccaccagggaaaggaaaagatggccaaactggagaaccaggacca
ccggggattcaaggcccacctggtgcaaagggccagccgggaccacgtgggcagattggg
gttccaggagatcggggccctccaggagaagggaaagaaggaccaccggggccctcagga
aaaaacggggagccaggagctgtgggtttgagaggcccaccaggtctgcctggtcctcaa
ggcccagcagggcacaatggtttagcaggaaggccaggagaaaagggatcacctggagaa
cctggaaaggcagcagatctatctgacatgaatctgaaggacctctgctcagactgccct
gcaggtccacctggaccacctgggctcccaggactccctggagataaaggacaacaggga
cttcctggaaaaaatggagaagatggatatcagggcccacctggaccatcaggaccaaca
gggactcctggagctgatggtgcaaagggagtaaaaggggatcaaggacctcctggaagc
cctggagaaaaaggagacctgggtcatcaaggaccccctggtcgccccggtcctcctgga
ttgatgggtgcagctggtaatgatggacaacctggcccagttggtccctcagggcctgct
ggagaaaagggtaaagagggtcctaaaggaatccaaggaccaccaggtcttcctggcttg
ataggtcaaccagggaaaatgggcaaagatggtcgaccaggagaagcaggagaacctggc
aagcaaggtgaacctggaccttcaggaaaccctggactcaggggcctcccaggttttaaa
gggcacagaggagaacctggaactccaggaaccaagggagaagatggaaaacctggccta
cctggacgtgatggtaaacctggaaatgagggtgttaaaggacctccaggcccagaagga
cttgttggagcaagaggagaacctggcaaaccaggtgaaccaggaccatctggaaaatca
ggtctcccaggaaccccaggtctcagaggggacaaaggagagcctggcagcataggatta
ccaggtttcagtgggccgaagggcccagcgggtccacctggtccgactggccctgagggg
aaacagggaacaccaggccgagcaggagaacgtggtttcaagggagagaagggtgaccac
ggtattaaaggagataaaggacaatctggagagcctggtatgcctggaaaccctggtcct
ccaggcaggaagggccacactgggatgatgggcatgtcaggaccgccaggtgaaatagga
cccccagggcaacagggaccttcaggaaaccctggtctgcctggaccaaggggagagtct
gtgtcactggagcagatgagaagactcattcaggaggagctggtaaaacaattagatgcc
aaactggtgtacctcatgagtcagatccaacctgcccacgtaaagagtacaacaggtcgc
ccaggacctccaggcccgcctgggaaggatggcagcactggacgaccaggaccccctggt
gagccgggaatgcctggacaaaatggaggagaaggacccagagggccaatgggccctaca
ggtgagaaaggagcaagaggagagcaaggagatcctggtgtgggtgaacgaggagaacga
ggtcctcctggtcctataggtccagctggaatgcctggatacggcaaagatggaagccca
ggacaaaccggagcccaaggcgaaccaggaaatccaggacctcatggtcaacctggacct
ccgggtccagctggacagtgtgatcctacccaatgtgcctactatgccagcctggcacag
agaccccacactaagaatgttaagggaacttaa
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