Austrofundulus limnaeus (annual killifish): 106535455
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Entry
106535455 CDS
T06063
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106535455
04020 Calcium signaling pathway
106535455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106535455
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106535455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
106535455
NCBI-ProteinID:
XP_013887914
UniProt:
A0A2I4D6R2
LinkDB
All DBs
Position
Unknown
AA seq
1963 aa
AA seq
DB search
MARFGDEVPARYGGVGGGPGGMGPGGRGGSRQGGPHGHGHGHGHGAHGAHGAHGHGPPHG
GPGAQRMYKQSMAQRARTMALYNPIPVRQNCFTVNRSLFIFSEDNFVRKYAKKITEWPPF
EWMILATIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFH
KNSYLRNGWNVMDFVVVLTGILSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIM
KAMIPLLQIGLLLFFAILMFAIIGLEFYIGKFHQTCFDNNTGEIREEFPCGHEPPSRLCP
EGTICRSYWLGPNYGITQFDNILFAILTVFQCITMEGWTDLLYYSNDASGSTWNWMYFIP
LIIIGSFFMLNLVLGVLSGEFAKERERVENRREFLKLRRQQQIERELNGYLEWICKAEEV
ILADDENENDYDGSRRRATKNHKSKAELLNPEEGEGDLAVGSPFARASLKSSKLEGSTFK
RRERRFRFFVRRVVKSQAFYWTVLCLVGLNTLCVAVVHYDQPEPLSDFLFYAEFIFLGIF
LTEMFIKLYGLGRQAYLNSSFNCFDCIVISGSIFEVLWSIIQPGTSFGISVLRALRLLRI
FKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFENGTPPTN
FDTFPAAIMTVFQILTGEDWNMVMYDGIKSQGGVNKGMAFSVFFIVLTLFGNYTLLNVFL
AIAVDNLANAQELTKDEQEEEEAASQKIALQKAKEVAEVSPLSAANLSIAANKVHSECHN
ASDPFLDCKEQQKNHTKGVNKSVWEQRTKELRRQTLASSREALYNELDPDDRWKARTGRE
EHNNVNFSRHIRPDMKTHLDRPLVVDPRENRNNNTNKNTANNSDLCLTQNHSVDELHKQT
QLKQQSGGGGGGSSPPRPPLDRGESTESRRSRRGEHHHKSHVRLDATVIPGPGSEERPTR
RHHHTRSGSQGGGQSKHRKPRSHRKSAEAGEDGGEGGGAGKSGRNRSKGMEGGGEGGEQE
GAGDSSERKPRRSRHGNQDGEGRRMCQHRRKECSVPNLSTTRPIQKSLSRQNSQYSEDMD
NLMNTKLVSGSSPPNEGHKNPLANRAVVPGFGSALHLAKSGTHGSLVTLGSYGNIVHQRA
HSVIRLPHPDYTALDMPIFPSINAILQVNKNANTEPLPAKEDKDDDDDKGGEGGPRPMPP
YSSMFILSTTNPFRRACHYVCTLRYFEMCILLVIAMSSIALAAEDPVWPDSPRNNVLRYF
DYVFTGVFTFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGGGGSSKGK
DISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYLLFMFIFAVVAVQ
LFKGRFFYCTDESKEFERDCRGEYXVYERDNEVRAQKREWKKYDFHYDNVAWALLTLFTV
STGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQE
QGDKMMEDYSLEKNERACIDFAINARPLTRHMPQNKLSFQYRMWEFVVSPPFEYTIMAMI
ALNTIVLMMKYDEASPTYEAVLANLNIVFTSLFFLECVLKIIAFGFLNYFKDAWNIFDFV
TVLGSVTDILVTELGMDNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYV
CLLIAMLFFIYAIIGMQLFGNIATEKDGESAINEHNNFKTFVQALMLLFRSATGEAWHDI
MLACLGGKVCDPLSGNTEPECGSQVAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDS
SILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRM
DLPVADDSTVHFNSTLMALIRTALDIKIAKGGIDKHQMDAELRKEMMAIWPNLSQKALDL
LVTPHKATDLTVGKIYAAMMIMEYYRQSKIKRSQALRDEQVLQ
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcggagacgaggtgccggccaggtacggcggcgtcggagggggccccggc
ggcatggggcccgggggccgcggcggcagcaggcaaggcggaccccacggacacggtcac
ggacacggccacggcgctcacggcgctcacggcgcgcacggccacgggccaccgcacgga
gggcccggggcccagaggatgtacaagcagtccatggcgcagcgggcccggaccatggcc
ctctataaccccatccctgtgcgccagaactgcttcactgtcaaccgctcgctgttcatc
ttcagcgaggacaacttcgtgaggaaatatgccaaaaagatcaccgaatggcctccgttt
gaatggatgattcttgccaccatcattgccaactgcatcgtcctggctctggaacaacat
ttacctgatggagacaagacaccactgtctgagcggctggatgatacagagccatacttt
attgggatcttctgctttgagtctggaataaagatcctggcacttggttttgccttccac
aagaactcgtacctgagaaatggctggaatgtcatggactttgtggtggtgctcacaggg
attttgtccactgtgggttcagatttcgacttgcggactcttcgggctgtgagggtattg
aggcctctcaaactggtgtccggtatacccagcttacaggtggtgctcaaatctatcatg
aaggccatgatccctctgctgcagattggcctgcttcttttctttgccatcctcatgttt
gccatcatcggcctggagttctacattggaaaattccaccaaacctgctttgacaataac
acaggagagattagagaagaatttccatgtggtcacgaacctccatcacggctgtgtcca
gagggcaccatttgtagaagttactggttgggaccaaactacggcatcactcagtttgac
aacatcctgtttgctattctcaccgttttccaatgtatcaccatggagggttggacagat
ctgctctactatagcaacgatgcctccgggagcacgtggaactggatgtacttcatcccc
ttaatcatcatcggctccttcttcatgctcaacttggtgcttggtgtgttgtcaggagag
tttgccaaagagagagagcgtgtggagaacagaagagagttcctgaagctcagaagacag
cagcagattgaaagggaacttaatggttaccttgagtggatctgcaaggctgaagaagtc
atcttggcggatgatgaaaatgaaaacgattatgatggttctcgtagaagagccacaaag
aaccataagagcaaagcagaactgttaaacccagaggaaggggagggggacctggcagtg
ggttcaccgtttgcccgtgccagtctgaaaagctcaaaactagaggggtcaackttcaag
aggcgggagcgccgatttcgcttctttgtccgacgtgttgtgaagtcgcaggccttctac
tggactgtcctgtgtttggtgggcctcaacacactgtgtgtggctgtagtgcactacgac
cagcctgaaccactttcagattttctattttatgctgaattcatctttctgggaattttc
ctaaccgagatgtttataaaactgtatggcctgggcagacaggcctacctcaattcctct
ttcaactgctttgattgcattgtgataagtggtagtatatttgaagtgttgtggtccatc
atccagccgggcacgtcgtttggcatcagcgtgctccgagctctcaggttattacgaatc
ttcaaagtcaccaagtactgggcatcgttgcggaaccttgtcgtctctctgctcaactcc
atgaagtccattattagcttgctctttcttctcttcctcttcatcgttgtctttgccctg
ctgggcatgcagctcttcggaggacagtttaattttgaaaacggcacccctccaaccaat
ttcgatacctttcccgcagcaataatgacagtgtttcagatcctgactggcgaggactgg
aacatggtgatgtacgatggcatcaagtctcagggtggagttaacaaaggaatggccttc
tctgtcttcttcattgtcctcacactatttggcaactacactctgcttaatgtgttcttg
gctatcgcagtggacaatttggctaacgcacaggaactgaccaaggatgagcaggaggaa
gaggaagctgccagtcagaagatcgccctgcagaaagccaaggaggtggctgaagtcagc
ccgttgtccgctgccaacctctccattgcagccaacaaagtacacagtgagtgtcacaac
gcgtccgacccctttctggactgtaaagagcagcagaaaaaccacacaaaaggggtcaat
aagtcggtgtgggaacagcgcaccaaggagctgaggaggcagactctggcatccagccgg
gaggcactctacaacgagctggaccccgatgaccgctggaaggcaaggacagggagggag
gagcacaacaatgtcaacttttcacgtcacattcgcccagacatgaaaacccacctggat
cggcccttagtcgtcgacccccgtgagaaccgaaacaacaacaccaataagaacactgcc
aacaattcagacctctgtctcacccagaaccattctgttgacgaacttcacaaacaaaca
cagctcaaacaacagagcgggggtggcggaggaggttcgagcccacccaggcctccgctt
gatcgaggggagtccacagaaagtaggcggagccgcagaggtgagcaccaccacaagtcg
catgtccgactggacgctacggtratccctggacctggctcggaggagaggccaaccagg
cgccatcaccacacccggagcggcagtcaagggggtgggcagtcgaagcacaggaagccc
aggtcacacagaaaaagtgcagaagctggggaagatggtggggaaggaggaggggctgga
aaatcagggagaaataggagtaaagggatggagggaggtggagaaggaggagaacaggag
ggagctggcgacagcagtgagaggaagccaagaagaagtcgacacggcaatcaagatgga
gaagggaggagaatgtgccagcacagacgaaaggaatgcagtgtcccaaacctctccacc
acacgacccatccagaagagcctctccagacagaatagccagtacagtgaggatatggat
aaccttatgaataccaaacttgtctccgggtcttctccacccaatgaaggtcacaaaaat
ccacttgccaatcgtgctgttgtgcctggctttggctctgccctgcatcttgctaaaagt
ggcactcatggaagtttggtcacattaggtagctatgggaacattgtacatcaacgtgcg
cacagtgtgatcaggctgccccaccctgactacacagctttggatatgccaatattccca
tctattaatgccattctgcaagttaataaaaatgcaaacactgagcctcttccagcaaag
gaggataaagatgatgatgatgataaaggtggtgaaggaggtccccgacccatgcctcca
tatagctccatgttcatcctgtccaccactaacccatttcgacgggcatgtcactacgtt
tgcactctacgttattttgagatgtgcatcttgcttgtcattgccatgagcagtatcgcc
ttggctgctgaagatcctgtctggcctgattcccctcgaaacaatgtacttcgctatttt
gactacgtcttcacaggagtgttcacatttgaaatgctgataaagatggtggatcttggg
ttggtcttgcaccagggttcttatttccgggacttgtggaacatccttgactttatagtg
gttagtggtgctctggtggcctttgccttcaccggcggcggggggagcagtaagggaaaa
gacatcagtactatcaagtccttgagggttctgcgagtgctacgtcctttgaagactatt
aaacgtcttcccaaactaaaggccgtgtttgactgtgtggtgaactctctaaagaatgtg
ctcaacatcctgatcgtctacctactcttcatgttcatttttgcggtggtggctgtgcag
cttttcaaggggcgctttttttactgcactgatgagtccaaagagtttgagcgtgactgc
agaggcgagtatrtggtgtacgagcgtgataacgaagtgagggcgcagaagcgggagtgg
aagaaatacgatttccactatgataatgtggcttgggcccttctcaccctcttcactgtt
tccactggagaggggtggccgcaggtgctaaaacattcagtagatgcgacctatgagaat
cagggcccaagcccgggatacaggatggagatgtccatcttttacgtggtgtacttcgtg
gtcttccccttcttcttcgtcaacattttcgtcgctctcattatcatcaccttccaagaa
cagggtgacaagatgatggaggattacagtttagaaaagaatgagagagcttgtatagac
tttgccatcaatgccaggcctctgacacgtcacatgcctcaaaacaagctgagctttcag
taccgaatgtgggagtttgtggtgtcaccgccttttgaatataccatcatggctatgatt
gcactcaacaccatagtgctgatgatgaagtatgatgaagcttctcccacctacgaagct
gtgttagccaacctgaacatagtgtttacctccctcttcttcttggagtgtgtactcaag
atcattgcctttggatttctgaattatttcaaagatgcctggaatatttttgactttgtg
acagttctgggcagcgtcactgacatcctggttacggagcttgggatggataatttcatc
aacctgagtttcctgaggctgttcagggctgctcgtcttatcaagctgctcaggcaggga
gaaaccattcgcatcctgctctggaccttcgttcagtctttcaaggcgctaccttatgtc
tgccttctcatcgccatgctgtttttcatctacgccatcatcgggatgcagctatttggt
aatattgcaaccgaaaaagatggagagagcgccatcaatgagcacaacaacttcaagacc
tttgtacaggctttgatgctcctctttaggagtgccacaggagaggcatggcatgatatc
atgctggcgtgtttggggggtaaggtgtgtgaccccctgtcagggaatacagagccagag
tgtggcagccaggttgcctatctctactttgtctccttcatcttcttctgttcgtttttg
atgctgaatctgtttgtagccgtcatcatggacaactttgagtacctaactagagattca
tccattctgggaccccatcacctggatgagtatgtaaggatatgggccgagtatgatcct
gctgcatgcgggcgcatacattataaggacatgtacagtttattacgagttatcgacccg
cctcttggcttaggcaagaaatgccctcatagggtggcctgcaagaggttgctccgtatg
gatctccccgtggccgatgacagcacagtccattttaactcgactctcatggctctgatc
cggacagcgttggacatcaagatcgccaaggggggtatcgacaagcaccagatggatgca
gagctgaggaaagagatgatggccatctggcccaacctttcccagaaagccttggattta
ctggttacgccccataaagcgaccgacctgactgtggggaagatctatgctgccatgatg
atcatggagtactaccggcagagcaagatcaagcggtcgcaggctcttcgtgatgaacag
gtactgcagtaa
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