Algoriphagus sanaruensis: AO498_01000
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Entry
AO498_01000 CDS
T04334
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
alm
Algoriphagus sanaruensis
Pathway
alm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AO498_01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alm03400
]
AO498_01000
DNA repair and recombination proteins [BR:
alm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AO498_01000
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AO498_01000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
IMS_HHH
DZR
Motif
Other DBs
NCBI-ProteinID:
AMQ54949
UniProt:
A0A142EIJ4
LinkDB
All DBs
Position
211847..212455
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AA seq
202 aa
AA seq
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MNFPSKLIENAVTEISRLPGIGKKTALRLALHLLRQPEVFSEALSASILEMRQKTQYCRV
CHNISDEEVCSICESHRRDRATVCVVEDIRDVLAIENTNQFQGVYHVLGGVISPIQGIGP
DNLTIESLINRIGMGEIKEVILALSATMEGDTTSFYLGKRLKESGVKVSTIARGIPVGGE
LEFTDEVTLGRSILTRINYSQD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcccttctaaacttatcgaaaacgcggtcacggaaatttccagacttccgggc
attggaaaaaagacggcacttcgcctagccttgcaccttctcagacagccagaagtattt
tctgaagcgctttctgcaagcattcttgaaatgaggcaaaagactcagtactgccgagtt
tgtcataacatttcggacgaagaggtttgttcgatctgcgaaagccaccgaagggatcga
gctactgtttgtgtggtggaggatatccgggatgtattagcgattgaaaacaccaaccaa
tttcaaggggtatatcatgtacttgggggagtgatttctccgattcaagggatcggcccc
gataacctaaccatcgaaagcctgatcaatagaatcggcatgggagaaatcaaagaagta
atccttgcgctttcggctacaatggaaggagacaccacttcattttacttaggaaaaaga
ctgaaggaaagcggcgtcaaggttagcacgattgccagaggcatcccggttgggggagaa
ctcgaatttacagatgaagtgaccttaggaagaagtattctgacaaggataaattattct
caggattaa
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