Alcanivorax sp. NBRC 101098: AS19_18680
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Entry
AS19_18680 CDS
T03879
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AS19_18680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_18680
DNA repair and recombination proteins [BR:
aln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AS19_18680
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Trp_halogenase
Hpt
Motif
Other DBs
NCBI-ProteinID:
BAP14719
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Position
2059630..2062209
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AA seq
859 aa
AA seq
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MTADLSQHTPMMQQYLGIKAEHPDQLVFYRMGDFYELFFGDAQKAARLLDITLTQRGQSA
GKPIPMAGIPYHAAENYLARLVKLGESVAIAEQIGDPALAKGPVERKVVRIVTPGTVSDE
ALLEERRDNLLCAVFDHNNQYGCASLDLAAGRFVVTQVEGAEQLQALLERWSPAELLISE
EHGLPGRWSDRPGTRKRPSWEFDEDAARRQLCQQFQVQDLAGFGEPSPVAVSAAGALLGY
AKETQRGELPHITGLTVESFDDAVAMDAATRRNLELTETLDGQEQHTLAWVLDSTKTAMG
ARLLKRWVHQPLRNRTTLTQRQDQIDALRQGWCFESARDVLNEIGDMERILGRVALRSAR
PRDLTRLHASLKALPPLIGTLPAADCFCELIERIGQFPNQVELLGTAVIENPPMLIRDGG
VIAPGYSEELDELRSISENAGAILVDIETRERERTQLSTLRVKYNRVHGYYIELSRRESD
QAPADYQRRQTLKNAERFITPELKEFEDKALSASSKALALEKRLYEALLEKVAADLHALQ
RSAAAVAELDVLASLAERAEALNWVRPQLVDDEAIIEIVDGRHPVVEQVLDDAFVPNSLH
LDNARRMVIITGPNMGGKSTYMRQTALIALLAHLGSCVPAASARIGSLDRIFTRIGSSDD
LAGGRSTFMVEMSETANILNNATAQSLVLMDEIGRGTSTFDGLSLAWAAAEHLARNLKSF
TLFATHYFELTQLPEQLPGIYNAHLTASEHDNRIVFLHRVQEGPASRSYGLQVAQLAGVP
SSVIHRAGEKLRELEQSKPLAPSATPPSSYAAPSPAAAPAQASLFNEPNAIELALTDLDP
DELTPKQALEALYTLKKLT
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcggacctaagccaacatacgccgatgatgcagcaatacctcggcattaaggcc
gaacacccggaccagctggtgttctaccgcatgggggatttctatgagttgttctttggc
gatgcgcagaaagcggcgcgactgctggatatcaccctgacccaacgcggtcaaagtgcc
ggcaagccgattcccatggccggcattccctaccacgcggcggagaactatctggcgcgg
ctggtgaagctgggcgaatccgtggccattgccgaacagatcggtgacccggcgctggcc
aaggggccggtggagcgcaaggtggttcgcatcgtcacgcccggtacggtgagcgatgag
gccttactggaagagcgtcgggataatttattgtgcgcggttttcgatcataataatcaa
tacggttgcgccagcctggatttggccgccgggcgctttgtcgtcactcaagtagaaggt
gccgagcaattacaggccttgctggagcgctggtcgccagccgaattgttgatcagtgaa
gagcatggtctgccagggcgctggtccgatcgaccgggtactcgtaaacgcccgagctgg
gagtttgatgaagacgctgcccgtcgccagctgtgccaacagttccaggtgcaggatctg
gccggctttggtgagccgtctcccgtggcggtttccgccgctggcgcactgcttggctat
gccaaggaaacccagcgcggcgaactcccacatatcaccggcctaacagtagaaagcttt
gatgatgcggtcgccatggatgcggccacccgccgtaacttggagctgactgaaaccctg
gatggccaggagcaacacaccctggcctgggtgctggacagcaccaaaacggccatgggc
gcgcgcttgcttaaacgctgggtacaccagccattgcgcaaccgcaccacgctcacccag
cggcaggaccagatcgacgccctgcgtcagggctggtgctttgagtccgcccgcgatgtg
cttaacgagatcggcgacatggaacgcattctcggccgggtggcgttacgttctgctcgc
cctcgggacctgacgcgcctgcacgccagcctcaaagcgctgccgcctctaatcggcacc
ctacccgccgccgattgtttttgcgaattgattgagcgcatcggccagtttccgaaccag
gtggaattgctgggcacggcggtgatcgagaatccgcccatgctgatacgcgacggcggc
gtcattgctcccggttacagtgaagagctggatgagctgcgttccatcagcgaaaacgcc
ggtgcgattttagtggatatcgaaacccgcgagcgcgaacgtacccagctttccaccctg
cgcgtgaagtacaaccgcgtgcatggctattacattgagctgtcgcgacgcgagtccgat
caggcgccggcggattatcaacgccgtcaaacactgaaaaatgctgaacggtttatcact
cccgaactgaaagaatttgaggacaaggccctgtccgcctccagcaaagctctagcgctg
gagaaacgcctctacgaagcactactggaaaaagtggccgccgacctgcacgcccttcag
cgcagtgctgccgccgtggccgagctcgatgtgctggcatcgctggccgaacgggccgaa
gcactcaactgggtgcgcccacagttagtagatgacgaagcgatcatcgaaattgtggat
ggccgtcacccggtggtggaacaggtgctagacgacgcgttcgttcctaacagcctgcac
ttagacaatgcccgccgtatggtgatcattaccggccccaacatgggcggtaaatccacc
tacatgcgccaaaccgccctgatcgcgctgctcgctcaccttggcagctgtgtgccggcg
gccagtgcccgcatcggtagcctggaccggatcttcacccgcattggctcgtccgatgat
ctggccggtggccgctccacctttatggtggaaatgtcagaaaccgccaacatcctcaac
aacgccaccgcccaaagcctagtactgatggacgagattggccgcggcaccagcactttt
gatggcctgagcctggcctgggctgccgccgagcacctagcgcgcaatctcaagtcgttt
accctgttcgccacacactacttcgagttgactcaactaccagagcaactgccgggcatc
tacaacgcacacctgaccgccagcgaacacgataaccgcattgtctttctgcaccgagta
caagaaggaccggccagtcgcagttacggtcttcaggtagcccaactggcgggagtgccg
agcagcgtgatccatagagccggtgagaaattacgcgagttggaacaaagcaaaccgctg
gcgccttcagccactccccccagcagctatgccgccccatcaccggcggcggctccggct
caggcctcactattcaacgaacccaatgcgatcgagctggcgttgaccgatctagaccca
gacgagctgacaccaaagcaagccctggaggcgctatatacattgaaaaagctgacttga
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