Poseidonibacter parvus: LPB137_06550
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Entry
LPB137_06550 CDS
T04722
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alp
Poseidonibacter parvus
Pathway
alp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPB137_06550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alp03021
]
LPB137_06550
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_06550
Enzymes [BR:
alp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPB137_06550
Transcription machinery [BR:
alp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPB137_06550
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPB137_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
APW65527
UniProt:
A0A1P8KLT9
LinkDB
All DBs
Position
1315545..1316543
Genome browser
AA seq
332 aa
AA seq
DB search
MKKFADTPFLPTEVEIETINDNEAKISAYPFESGFAITLAHPLRRLLLSSSVGYAPIAVK
IEGASHEFDSLRGMLEDIAIFIINLKNIKFKINGDEEQVVVEYSFDGPKEIKGEDLINSD
VEVVSPDVHLATINSDCNLTFSVIIQKGIGYMPSEDIREIVGPDYIPVDAFFTPVKKVVY
DIEKMLVEDNPNFEKAVFNVQTNGQISPITAFKEAVSVMYSQMSVFNKVFDLSEVTVSDA
GEEPVELKDLVVKIDDLNLSARSFNSLDRAGLKFLGELVLMSEVEVKNIKNLGKKSYDEI
AEKLESLGFPVEDTLPENVASALRRKLEQLKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttgcagacacaccgtttttaccaacagaagttgaaatcgaaactatcaat
gataatgaagcaaagatttctgcatatccatttgaaagtggttttgcaataactttggca
caccctttaagaagacttcttcttagttcttcagttggttacgcaccaattgcagtaaaa
attgaaggagcttctcacgagtttgactcgttaagagggatgctagaagatatagctatt
tttattattaaccttaagaatattaagtttaaaattaatggtgatgaagaacaagtagta
gtagaatattcttttgatggaccaaaagaaattaaaggtgaagacttaatcaactctgat
gttgaagtagtttctccagatgttcacttagctacaattaactcggattgtaatttaaca
ttctctgttattattcaaaaaggtataggttatatgccttctgaagatattagagaaatt
gttggaccagattatattccagtagatgctttctttacaccagtaaaaaaagtagtttat
gatattgaaaaaatgttagttgaagataatcctaactttgaaaaagctgtatttaatgta
caaacaaatggacaaatttctccaataactgcttttaaagaagctgtttctgttatgtat
tctcaaatgtcagtatttaataaagtatttgatttatcagaagtaacagttagtgatgca
ggtgaagagccagtagaactaaaagatttagttgtcaaaattgatgacttaaatttaagt
gctagatcattcaactctttagatagagctggattaaaattcttaggtgaattagtactt
atgagtgaagttgaagtaaaaaatatcaaaaaccttgggaaaaaatcttatgatgaaatt
gctgaaaagcttgaatcacttggtttcccagttgaagatacacttccagaaaacgttgct
tctgcattaagaagaaaattagagcaacttaaagcataa
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