Allochromatium vinosum: Alvin_2308
Help
Entry
Alvin_2308 CDS
T01168
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
alv
Allochromatium vinosum
Pathway
alv00633
Nitrotoluene degradation
alv01120
Microbial metabolism in diverse environments
alv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
Alvin_2308
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Alvin_2308
Enzymes [BR:
alv01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
Alvin_2308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
ADC63225
UniProt:
D3RMT7
LinkDB
All DBs
Position
complement(2627626..2629416)
Genome browser
AA seq
596 aa
AA seq
DB search
MSVQTPNGFQLDTAGRRVVVDPVTRIEGHMRCEVNLDEQNVIRNAVSTGTMWRGLEVILR
GRDPRDAWAFTQRICGVCTGTHALTSVRAIEDALDIQIPENANSIRNIMQLTLYAHDHLV
HFYHLHALDWVDVVSALKADPKATSALAQSISDWPLSSPGYFRDVQTRIKRFVESGQLGP
FTNGYWGNPAYRLPPEANLLAVTHYLEALDFQKEIVKIHTIYGGKNPHPNWLVGGVPCAI
NIHDAGAVGAVNMERLNLVSSIIDRTIEFIDKVYLPDLMAIASYYKDWTHGGGLSSQAVL
SYGDIPERANDDSSDNQCLPRGAIINGKLEEVHEVDLRDPEQIQEFVAHSWFKYKDESKG
LHPWDGVTEPNFVLGPNTKGSQTRIEAIDENAKYSWIKAPRWRGHAMEVGPLARYIIGYA
KGIPEFKEPVEKVLTDLQLPVSALFSTLGRTAARGLEASWAAHKLRHFQDKLVANLKAGD
SATANPDKWEPRTWPKLTKGVGTTEAPRGALGHWVVIEKGKIANYQAVVPTTWNGSPRDP
AGNIGAFEAALLNTPVAVPDQPLEILRTLHSFDPCLACSTHIMSPDGEELTRVKVR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcagacccccaacggcttccaactcgacacagccggacggcgcgtcgtcgtc
gaccccgtgacccgcatcgagggtcacatgcgctgcgaggtcaatctcgacgagcagaac
gtcatccgcaatgccgtctcgaccggcaccatgtggcgcggtctggaggtgatcctgcgc
ggtcgcgatccgcgcgacgcctgggccttcacccagcgtatctgcggtgtttgcaccggc
acccacgccctgacctcggtgcgcgccatcgaggatgcgctcgacatccagatcccggag
aacgccaactccatccgcaacatcatgcagttgacgctctacgcgcacgaccatctggtg
cacttttaccatctgcatgcgctcgactgggtggacgtggtttcggcgctcaaggccgat
cccaaggcgacctcggcgctggcgcagtcgatctcggactggccactgtcctcgcccggc
tatttccgcgacgtgcagacccggatcaagcgctttgtcgagtccggtcagctcggtccc
ttcaccaacggctactggggcaatccggcctaccggctgccgcccgaggccaatctgctg
gccgtcacccactatctggaggcgctcgacttccagaaagagatcgtcaagatccacacc
atctacggcggcaagaacccgcatccgaactggctggtcggcggcgtgccctgcgccatc
aacatccatgacgcgggcgcggtgggcgcggtcaacatggagcggctgaatctggtctcc
tcgatcatcgaccgcaccatcgagttcatcgacaaggtctatctgccggacctcatggcc
atcgcttcttactacaaggactggacccacggcgggggcttgagcagtcaggcggtgctg
tcctatggcgacatccccgagcgcgccaacgacgattcgtccgacaaccaatgcctgccg
cgcggcgcgatcatcaacggcaagctcgaagaggtccacgaggtcgatctgcgcgatccc
gagcagatccaggagttcgtcgcccattcctggttcaagtacaaagacgagtccaaggga
ctgcacccctgggacggcgtgaccgagccgaacttcgtcctgggtccgaacaccaagggc
agccagacccggatcgaggccatcgacgagaacgccaaatacagttggatcaaggctccg
cgctggcgcggtcacgcgatggaggtcgggccgctggcacgctacatcatcggctatgcc
aagggcatcccggagttcaaggagccggtcgagaaggtgctgaccgacttgcagcttccg
gtctcggcgctgttctcgacgctcgggcgcacggcagcgcgcgggctggaggcgtcctgg
gcggcgcacaagctgcgccatttccaggacaaactggtggccaatctcaaggccggcgac
agcgcgaccgccaatcccgacaaatgggagccgcgaacctggccgaaactgaccaagggt
gtcggcaccaccgaggctccacgcggtgcgctcgggcactgggtggtgatcgagaagggc
aagatcgccaactatcaggccgtggtgccgacgacctggaacggctcgccgcgcgatccg
gcgggcaacatcggcgctttcgaggccgcgctcctgaacacgccagtggcggttcccgat
cagccgctggagatcctgcgcacgctgcacagcttcgatccctgtctggcctgctcgacg
cacatcatgagcccggacggcgaggagctgacgcgggtcaaggtccgctga
DBGET
integrated database retrieval system
