Arabidopsis lyrata (lyrate rockcress): 9299646
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Entry
9299646 CDS
T01578
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9299646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9299646
03041 Spliceosome [BR:
aly03041
]
9299646
03032 DNA replication proteins [BR:
aly03032
]
9299646
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
9299646
Spliceosome [BR:
aly03041
]
Complex A
U1 snRNP components
Sm proteins
9299646
U2 snRNP components
9299646
Complex B
U1 snRNP components
9299646
U4/U6.U5 tri-snRNP components
9299646
Complex C
U2 snRNP components
9299646
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
9299646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
9299646
NCBI-ProteinID:
XP_002865361
UniProt:
D7MM06
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGSKKT
KEDREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG
PLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPQIIRPPGQMPPPPPSGFTGQGGPPPPYG
MRPPYPGPPPPQYGGQRPMMIPPPGGMMRGPPPPHGMQGPPPPRPGMPPPPGGAPMFAPP
RPGMPPPPPNHHNQQH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgcttcagttcataaactacaggatgcgagtaacg
atccaagacggacgtcagctaatcggaaaattcatggcgttcgatcgtcacatgaatctc
gttctcggcgactgcgaagagtttcgaaaacttcctccggcgaaaggtagtaagaagacg
aaagaagatagagaagagcgtcgtacgcttggtttggttttacttagaggagaagaagtg
atttcaatgactgtcgaaggtccaccaccaccggaagaatctcgcgccaaatcaggatct
gtaaccgccgttgctggtcccggaatcggtcgtgctgctggacgtggtgtacctactggt
ccattggttcaagctcagcctggattatctggtcctgttcgtggaattggtggacctgct
ccgggaatgatgcagcctcagatctctagaccaccgcagattattcgtccgccaggacaa
atgccgccaccgcctccgtctggttttactggtcaaggaggtcctcctccaccttatggt
atgagaccaccgtatcctggtccaccaccgcctcaatatggtggacaaaggccaatgatg
attcctccgcctggtggtatgatgagaggacctcctccacctcatgggatgcaaggacct
cctccgcctcgccctggaatgcctccaccgcctggtggtgctccgatgtttgctccgcct
cgtcctggcatgccgcctcctccgccaaatcatcataatcagcaacattga
DBGET
integrated database retrieval system
