Arabidopsis lyrata (lyrate rockcress): 9303306
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Entry
9303306 CDS
T01578
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9303306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9303306
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
9303306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
9303306
NCBI-ProteinID:
XP_020872744
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MVAPVPPGPPRPNSQQNSGPPNFYPGSQGNSNSLADNMQNLSLNRPPPMMPGSGPRPPPP
FGQSPQPFPQQSPSYGAPQRGPSPMSRPGPPAGMARPGGPPPGSQPAGFQSNAPLNRPTG
PPSSQPPFGSRPSMPGGPVPQPAASSSGFPAFGPSGSVAAGPPPGARPMAFGSPPPIGSG
LSMPPSGMLGGPVSNGHQMAGSGGFPRGTQFPGAAVTTPQAPYMQPPSAPFARAPPQPLG
THSLSGNPPLNLSTAPSMPPPATFPGAPHGRPAVSNLPYGPPSAQVPPPLGFPGPMQPPR
YGMGPLPNQSMTNIPTAMGQPGASVPGPSRIDPNQIPRPGSSSSPTVFETRQNNQANPPP
PATSDYVVRDTGNCSPRYMRCTINQIPCTVDLLSTSGMQLALMVQPLALSHPSEEPIQVV
DFGEGGPVRCSRCKGYINPFMKFIDQGRKFICNFCGYTDETPRDYHCNLGPDGRRRDVDE
RPELCRGTVELVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACNAIQQVLSDLPEG
PRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIVQLSECRQHLELLL
DSIPTMFQESKTPESAFGAAVKAAFLAMKSKGGKLMVFQSILCSVGVGALSSREAEGRAN
MSAGEKEAHKLLQPADKTLKTMAIEFAEYQVCVDIFITAQAYVDMASISVIPRTTGGQVY
CYYPFSALSDPPKLYNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLP
AIDCDKAVMVTLKHDDKLQDGAECAFQCALLYTTIYGERRIRVTTLSLSCTNMLSNLFRA
ADLDSQFACMLKQAANEIPSKALPLVKEQATNSCINALYAYRKFCATVTSSGQLILPEAL
KLFPLYTLALTKSVGLRTDGRIDDRSFWINYVSSLSTPLAIPLVYPRMISVHDLDAKDNE
GSVLPPPIPLSSEHISNEGVYFLENGEDGLLYVGESVDSDILQKLFAVPSAAEIPNQYLL
QQYDNQLSKKFNDAVNEIRRQRCSYLRIKLCKKGDPSGMLFLSYMVEDRTAGGPSYVEFL
VQVHRQIQLKMN
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggttgctcctgtgcctccagggccacctagacccaacagtcagcaaaattccgggcca
ccaaatttctacccgggttcacaagggaattcaaattctttagccgacaatatgcagaat
ttgagcttgaatcgaccacctccgatgatgcctggctcaggtcctagaccacctcctcct
tttggtcagtcaccacagcctttccctcagcaatccccttcttatggagctcctcaacgt
gggccttcacccatgtcccggcctggacctcctgctgggatggcgaggccaggtggtcct
cctccgggatcacaaccagctggatttcagtcaaatgcacccttgaacagacccactggt
ccaccttctagtcagccaccatttggctctagaccatcaatgcctggaggaccagtcccg
cagcctgccgcctcatctagtggttttccagcttttggtccatcaggtagcgtagctgca
ggtcctcctccaggagctcgcccaatggcatttggttcacctccacctatcggatctggc
ttgtctatgcctccctcaggcatgcttggtggtccagtcagtaatgggcatcaaatggct
ggttcagggggatttccgagaggaacccagttccctggtgctgctgttacaactccacag
gcaccctatatgcagcctccttcagcacctttcgctcgggctcctccgcagccactaggt
acacattctctttctggaaatccaccattaaatctgtctactgctccttcaatgccccca
ccggcaacctttcctggagcccctcatggcaggccagcagtatcaaacttgccttacggt
ccaccatcagcgcaggtcccccctcctctaggctttcctggcccaatgcaaccaccaaga
tatggcatgggtcctttgccaaatcagtcgatgaccaacatacccactgcgatgggccaa
cccggtgcctctgttcctggaccctcaagaattgatcctaatcaaatcccaaggccaggt
tcaagctccagcccaactgtgtttgaaactcgccagaataatcaggctaatcctcccccg
cctgctactagtgattatgttgttcgagacactggaaattgtagtccccgttacatgagg
tgtacgatcaatcagatcccatgtacagttgatcttctatctacatctggaatgcaactg
gcgttgatggtccaaccgctggcgctttctcatccatctgaagagcctatacaagttgtg
gactttggtgagggtgggcctgttcgatgttcacgctgtaagggttacataaatcctttc
atgaagttcattgaccaaggaaggaagttcatctgtaatttctgtggatacactgatgag
actccccgtgactatcactgtaatctgggtccagatggtagacgtagggacgttgatgaa
agacctgagctgtgtaggggaaccgttgagttggttgctacaaaagaatacatggtacgg
gatccaatgccagcagtgtattttttcctcattgatgtctcaatgaatgcgatacaaaca
ggtgctactgccgctgcttgcaatgcaatccagcaagtactttcagaccttcctgaaggt
cctaggacatttgttgggattgctacatttgactcaacaatccacttctataatttgaaa
cgtgcactgcagcagccattgatgctcattgtccctgatgtacaagatgtttatacacct
ttagaaacagatgtcattgttcagctatctgagtgccgtcaacatctagagcttttgctg
gatagtatcccaacgatgtttcaggaaagtaaaactcctgaatctgcttttggtgcagca
gttaaggctgctttcttggcgatgaagagcaaaggagggaagcttatggtatttcaatca
attttgtgttctgttggtgttggagcactttcttctagagaggctgaagggagagctaat
atgtctgctggtgaaaaggaggcccataaattactacaaccggcagacaaaactctaaag
accatggctattgaatttgctgaataccaggtctgtgttgatatatttatcacagctcag
gcctatgttgacatggcttcaatttccgtcattccaagaactactggaggacaggtgtat
tgttattaccctttctcagctctctcagatcctcccaagctttacaatgatctcaaatgg
aatattactaggccacagggttttgaggctgtcatgcgagtcagatgcagccagggtatt
caagtgcaagaatactccgggaatttctgcaaacgcattccaactgacattgatctacca
gcgattgactgtgacaaagctgtaatggtgacgttaaagcatgatgacaaactacaagat
ggagctgaatgtgctttccagtgcgcccttctgtatactacaatatatggagaaagaaga
attagggttaccacattatcactctcctgtacgaacatgctcagtaatttgtttcgcgca
gctgacttagattctcaatttgcttgtatgctgaaacaagcggccaatgaaattccttcg
aaggcacttccactggtaaaggagcaagcaactaatagttgcataaatgcactctatgcc
taccgtaaattttgtgctacagtgacatcatctggacaacttattcttcccgaggcgctc
aagctatttccattatatactctcgcattgaccaaaagtgtgggtttaaggacggatggg
agaattgatgatcgatcattctggatcaactatgtatcttccctttctactcctttggca
atcccattggtttatcccaggatgatttctgttcacgaccttgatgcgaaggacaatgag
ggatcggttcttcctcctccaatcccattgtcaagtgaacatatcagcaatgagggagtt
tattttcttgagaatggtgaagacggtctactatatgttggcgaatcagtagactctgat
attctgcagaaactttttgctgttccttcagctgctgaaattcctaaccagtatctgctg
cagcaatatgataatcagttatcaaagaagtttaatgatgctgtgaatgaaataaggagg
caaagatgttcttacctaagaataaaattgtgcaagaagggagatccatcaggaatgttg
tttctctcgtatatggtagaggacaggaccgcaggcggcccgtcgtatgtggagtttctc
gtgcaagttcatcgccaaatccagctcaaaatgaactga
DBGET
integrated database retrieval system
