KEGG   Arabidopsis lyrata (lyrate rockcress): 9303615
Entry
9303615           CDS       T01578                                 
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5
  KO
K12199  vacuolar protein sorting-associated protein VTA1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9303615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9303615
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT associated proteins
    9303615
SSDB
Motif
Pfam: Vta1 Vta1_C
Other DBs
NCBI-GeneID: 9303615
NCBI-ProteinID: XP_020873510
LinkDB
Position
Unknown
AA seq 421 aa
MSNANEPARALLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSILMSLI
NQLEKDKKSLNLSPDDNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAATIFFEILSQ
FGPVPPDIEQKQKYAAWKAADIRKAIKEGRKPTPGDPVDDDNDLSIPSSGPSGSYDHGAS
DSNSSSHHRTEPDPSHDSNDDSSHHHFPEVPQHPLPPRFHDNPTNDYPIDVPPPPPSSYP
SNDLHPPPTGPSDSPYQHPYSHQPYHQDPSQHMPPPQNYSAHEPSPNSLPNFQSYPSFSE
SSLPSTPPHYPSHYQNPEPYYSSPHSAPAPSSTSFSSAPPPPPYSSNGRINIAPVLDPAP
SPAQKYHYDSSYQPGPEKVAEAHKAARFAVGALAFDEVSTAVEHLKKSLELLTNPSAGAG
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtcgaacgcaaacgaaccagccagggctcttctaccttacctgcaacgtgccgacgag
ctgcagaagcatgaaccacttgttgcttattactgtcggctatatgccatggaacgagga
ttgaagattccgcagagcgagagaactaagaccaccaattcgattcttatgtctctcatt
aatcaacttgaaaaggataagaaatcattgaatctgtccccagatgataatatgcatgtg
gaggggtttgcactaagtgtctttgcaaaggcagacaagcaggatcgtgcaggaagagct
gacttgggcactgccaaaactttttatgctgcgacaatcttctttgaaattctgagccag
tttggccctgtacctcctgatatagagcagaaacagaagtatgctgcttggaaggctgct
gacataaggaaagccattaaagaaggaaggaagcccactccaggtgatcctgttgatgat
gataatgatttatccatcccatcaagcggtcctagtggctcctatgatcacggtgcaagt
gattccaactcatcaagtcatcatagaacagagcctgatccatcccatgactcgaatgat
gactccagccaccatcacttccctgaagtgccacaacaccctctacctcccaggtttcat
gacaatcctaccaacgattatcccatagatgtcccgcctccaccaccttcttcttaccct
tccaacgatctccatccccctcccacgggaccatcagactccccttaccagcatccttac
agtcatcaaccataccaccaagacccgtcacaacacatgccgccaccacaaaactactca
gcccatgagccttctccaaattctctccccaatttccaatcttatcctagctttagtgag
agcagcctcccatccactcctccccactacccttctcactaccaaaacccagaaccttac
tattcttctccgcattccgcacctgctccttcttccacaagcttctcctctgctcctcct
cctccaccttactcatcaaacgggcgtatcaatattgctcctgtgctagatcctgcaccg
agtccagctcagaagtaccattacgacagcagctaccagccagggcctgagaaggttgca
gaggcacacaaagctgctagattcgcggtgggagctttggcttttgatgaagtctcgact
gctgtagaacatctcaagaagtcacttgagttgctaacaaatccatcggccggtgccggt
cactga

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