Arabidopsis lyrata (lyrate rockcress): 9307739 Help Entry 9307739           CDS       T01578                                  Name (RefSeq) nipped-B-like protein isoform X1   KO K06672   cohesin loading factor subunit SCC2 Organism aly  Arabidopsis lyrata (lyrate rockcress) Brite KEGG Orthology (KO) [BR:aly00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:aly03036]     9307739 Chromosome and associated proteins [BR:aly03036]  Eukaryotic type   Sister chromatid cohesion proteins    Adherin complex     9307739 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nipped-B_C Cohesin_HEAT PDS5 PHD Cnd1 PHD_2 zf-RING_15 Porphobil_deam API5 Polysacc_deac_1 Motif Other DBs NCBI-GeneID:  9307739 NCBI-ProteinID:  XP_002873731 UniProt:  D7M7D7 LinkDB All DBs Position Unknown AA seq 1847 aa AA seqDB search MSNPSSSGWGSSSSLTQFGIGLANTVQSEVAPYLPLPSLPIFCGAAEPGDFKLFDEVGEG SSYRSLDRSEILAQSSRIANMLQETDVSYLDLRNEARAPDFNSGEHFQLYDQVLRCNPGA FEYVTPGPTCDPVFTNEVPQKIISEPSVPVKMHRQTDNHLARSIEPEPVKRVLRSNHVEE DHSWQHETLTNQSPNDGTAYHDSRPETITMNEISASKKPKGKKKRKDDLSSVQPDPSVLQ ESIVNSFCEMLEDFCGRAEVPGDDRDETEWSSVPVDEVRVLVNELMTIRSKMLLHMVPVD ILSRLLRTLDHQIHRAEGLSIYSEHSDSDSVLLVLGALESIHASLAVMANSDMPKQLYKE EIIERILEFSRHQMMAVMSAYDPSYRTGSKPAENVAFEGDDDDDPDHEMGSASKRRRIGK SGKVKKSSVNRISGAVNTALQKLCTILGLLKDLLLVERLSDSCILQLLKTSITTFLVENI QLLQLKAISLIGGIYNSYSQHRTYVIDEISQLLWKLPSSKRALRAYLLPDEEQRQIQMVT ALLIQLVHNSTNLPETSRQASSGNSILETPVDVGYLTKCHEAATETCCLFWTRVLERFTS FKGQDASEIKLIIENLVMDLLTALNLPEYPSVSPILEVLCVILLHNAGLKSKDVSARIMA IDLLGTIAARLKRDAVLCSKDRFWTLLESDSEINVDQVCTKDCTICLGKRAGNLLVCQIC QRRFHGDCLGLKELDIPSRNWHCPFCVCKRKLLVLQSYCKTDTKGTGKLESEESIENPSM ITKTEVVQQMLLNYLQDAGSTDDVHTFICWFYLCLWYKDVPKSQDKFKYYIARLKAKSII RNSGATTSFLTRDAIKKITLALGMNSSFSRGFDKILNMLLASLRENAPNIRAKALRAVSI IVEADPEVLCDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGIKYFEKVAERIK DTGVSVRKRAIKIIRDMCTSNPNFSEFTSACAEILSRISDDESSVQDLVCKTFYEFWFEE PPGHHTQFASDASSIPLELEKKTKQMVGLLSRTSNQQLLVTIIKRALALDFFPQAAKAAG INPVALASVRRRCELMCKCLLEKILQVEEMSREEGELQVLPYVLVLHAFCLVDPGLCTPA SDPTKFVITLQPYLKSQADSRTGAQLLESIIFIIDSVLPLIRKLPLSVTEDLEQDLKHMI VRHSFLTVVHACVRCLCSVSKLAGKGVSIVEHLLQFFFKRLEAQGSDNTQIAGRSLFCLG LLIRHGNSLISTSGGKNFNLSGCLNLFKRHLRTEDIALKVRSLQALGFILIARPEYMLEE DIGKIIETTLADEANGRMKMQALQNIYEYLLDAEKQLGSEKASDNVVNPIEQGGHTVPVA AGAGDTNICGGIVQLYWDKILGRCLDFDDQIRQTALKIVEVVLRQGLVHPITCVPYLIAL ETDPQEANQKLAHHLLMNMHEKYPAFFESRLGDGLQMSFIFMQSISQVTSEPNQSLQQKG STNMSGKNDHTSSTLTQARLGVSRIYKLIRGNRVSRNKFMTSIVRKFDNPTWSGSVISFM KYCTETLALLPFTSPDEPLYLVYSINRVMQIRAGAVESNLKALLHKESAKTQHGNGTYQQ GPIPGHMHMMDLNTRIQEEPTHWNSYAHPTPIDLNGAVYQDSRDQFTSYQVHNGKADVHK MTSSDPPELSTDDLQKIKVDCAAAIAIQLLLKLKRYLKVTYSLNDDRCQAYSPTEPLKPG DPLSRQSVAFDLSETRTDLPSTYQDLVQRYQEFKNAMREDTVDFTIYSSNVKRKRPTPRK TSRSAKKPVAYNEDDDDDDDDDRGWHGGGGRGAARRLNYSTRSSNRR NT seq 5544 nt NT seq  +upstreamnt  +downstreamnt atgagcaatccaagcagttccggctggggttcaagttcgagtttgactcagttcgggatc ggtttggctaatactgtgcagtcggaggttgctccttacttgccgctaccgtcgttgcct atattctgtggtgcggcggaacctggagacttcaagctgttcgatgaggttggcgaaggt agtagctacaggtcgttggatcgcagtgagattctagcgcaatctagtagaatcgcaaac atgcttcaagagactgacgtttcttacctggatcttagaaacgaggctagggcgcccgat tttaattctggggagcattttcagttatatgaccaagttctacgatgcaatcctggagca tttgagtatgttacccccggaccgacctgcgatccagtctttaccaatgaagtgcctcaa aagataatttctgagccaagtgttcctgtcaagatgcatcgacagacggataatcattta gctaggagtatcgaacctgaacctgtgaaaagggtattacgatcaaatcatgttgaagaa gatcatagttggcagcacgaaactctgacaaaccagtcaccgaatgatggtactgcatat catgactctcggcctgaaacgatcaccatgaatgaaatttctgcttccaaaaagccaaag ggaaagaagaaacgtaaagatgacttgtcttcagttcaaccagatccatctgtgctgcaa gagtccatcgtaaatagcttttgtgagatgttggaggacttctgtggcagagctgaagtc cctggtgatgatagggatgaaacagagtggtcatcagtgcctgttgatgaagttcgtgtt cttgtaaatgaattgatgactatacggtcaaaaatgcttctgcatatggtacctgttgat attctatcgaggttattgcgcactctggatcatcagatacacagggcagaaggcttgtcc atttatagtgaacattcagattcagattcagttttgttggttcttggtgcccttgagtca attcatgcatcgctagcagtgatggccaacagtgatatgccaaagcagctctacaaggag gagataattgagagaattctggagttttctaggcaccaaatgatggctgttatgtctgct tatgatccatcataccgcactggaagtaaaccggcagaaaatgtggcatttgaaggtgat gatgatgatgatcctgatcatgagatgggctcagccagcaaaaggcggcgcataggaaaa agcggcaaagtaaagaagtcgtcagtgaacaggatctctggagcagtgaatactgcacta cagaaactttgcacaattcttggcttactcaaggacctgttgttggtagaaaggttgtct gacagttgcattttacaactgctgaagacaagtattacaacatttctggtggaaaatatc caacttctgcaacttaaagcaattagcttaatcggtggtatttataattcatattctcaa caccgaacatatgtgatagatgaaatatctcaattgctctggaagttaccttcctcgaaa cgagcattgagagcgtatcttctccctgatgaagaacagaggcagattcaaatggtcact gctttgctcattcagttggttcacaacagcacaaaccttcctgaaacctcaagacaggct tccagtggaaactctatactggagaccccagttgatgttggctaccttactaagtgtcat gaagctgctacagaaacatgttgcctcttctggactcgtgtccttgaacgatttaccagt tttaagggtcaggatgcttctgagataaaattgattattgagaatcttgttatggactta ctgacagcattaaatcttcctgaatatccgtctgtgtctcctattcttgaggttctctgt gtcatactgctacataatgcagggttgaaatcaaaagatgtctctgctcgaataatggcc attgacttgctaggtacaatagctgcaaggttgaaacgtgatgctgtcctctgcagtaaa gacagattctggacgttactagagtcagatagtgaaattaacgttgatcaagtttgcaca aaagattgcactatttgtttaggtaaaagggctgggaacttattggtctgtcaaatttgt caaaggcggtttcatggtgactgtttgggtttaaaggaactagacattccaagtcggaat tggcactgtccgttttgtgtatgcaagaggaaacttcttgtactacagtcttactgcaag acggacaccaagggtactggtaagttggaatcagaagaaagcatcgaaaacccaagtatg attacaaagaccgaagttgtgcaacagatgctcttgaattaccttcaggatgcaggatct actgatgatgtgcatactttcatttgctggttttatctgtgcctttggtataaagatgtc ccaaaatctcaggataaattcaaatattacattgccagactgaaagcaaagtcaataatc cgtaactctggagcaactacttcgttcttgacaagagatgctatcaagaagattacttta gcccttggaatgaatagttccttttccagaggatttgataagattctaaacatgctcctg gctagtttaagagagaacgctcccaacattagggccaaagctttgcgagcagttagtata attgttgaagctgatccagaggtactgtgtgataaacgtgttcagttggctgttgaggga aggttttgtgattctgcaatatctgttagagaagcagcactggaacttgttggtaggcat attgcatcacatccggatgttggtataaagtattttgagaaggtcgctgagaggattaag gatactggagtgagtgttcgaaaacgagccatcaagataatacgtgacatgtgtacttca aatcccaacttctctgaattcacaagtgcgtgcgctgagatattatctcgtatcagtgat gatgagtctagcgttcaggatcttgtgtgcaaaactttctatgaattttggtttgaggaa cctccagggcatcatactcagtttgctagtgacgctagctccattccactggaactggaa aagaaaaccaagcaaatggttgggttgttaagcaggacctcaaatcaacagcttcttgta acaattattaagcgtgccctggccctggatttttttcctcaagcagctaaagctgctggt attaacccagttgctcttgcatcagtacgcaggcgctgcgagctgatgtgcaagtgctta ctggaaaaaatattacaggtagaagaaatgagccgtgaagaaggagagttgcaagtactt ccttatgtacttgttttgcatgctttctgtctggtggatcctgggctgtgtacaccggct tcagaccctactaaatttgtcatcaccttacagccgtatctgaagagtcaggctgatagt agaacaggagcacagttactagagagtattattttcattatcgattctgtcctaccattg atccggaagctgcctctaagtgtcacagaagatctggaacaagatctaaagcatatgatt gttcggcattcgtttctaactgttgttcatgcttgcgttaggtgtctttgttctgtgagt aaattggcggggaaaggtgttagcatagttgagcatcttcttcagttcttttttaagcgg ctggaggcccaaggttccgataacacacagattgctgggcggtcccttttttgtcttggc ttgcttattcgccatggaaattctcttattagcacctcaggtggcaagaatttcaacctc tctggctgtctcaatttgtttaaacgacatctccgaacggaagatattgctttgaaagtc aggtcgctgcaggctttaggattcatcctaattgcacgacctgagtatatgttggaagaa gacattggaaagataatcgagactacattagcagatgaagcaaatgggcgtatgaagatg caagcattacaaaacatctatgaataccttcttgatgcggaaaaacaattgggatccgag aaagccagtgataacgtggttaacccaattgagcaaggtggccatactgtacctgtggcc gctggtgcaggtgacaccaacatttgcggaggcattgtgcagttgtattgggataagata ttaggtagatgcttagacttcgatgatcaaattcgccagactgctctcaagatagtggaa gttgtactacgtcaaggcctagttcatcctattacgtgtgtcccttatttgattgccctc gagacggatcctcaagaggccaaccaaaagctggcccatcatttactaatgaatatgcat gagaaatatccggctttttttgagagccgtctcggtgacggacttcaaatgtcgtttatc ttcatgcaatccatcagccaggtcacttcagaaccaaatcaaagtcttcagcaaaagggt tcaacaaacatgtcgggcaaaaatgatcatactagtagtactctcacacaagctagactt ggagtctctaggatctacaagcttatccgtggaaacagggtttctcgaaacaaatttatg acttcaattgttcgcaagtttgataatccaacctggagtggctcagtaatatcctttatg aagtattgcactgaaacccttgctttacttccattcacatcacctgatgagccactctat cttgtatattccataaaccgagttatgcaaattcgggctggtgcagttgagtcaaatttg aaggctttgttacataaagagtccgcaaagactcagcatggaaatggaacgtaccaacaa ggtccgattcccggacatatgcacatgatggatctaaacacaagaatccaagaagaacca acacattggaattcctatgcccatccaactccaattgacctcaatggtgcagtataccaa gattcaagggatcagttcacttcatatcaagtccataatgggaaagcagatgttcacaaa atgacctcatctgatcctcctgaattatccaccgatgatctgcagaaaattaaggttgat tgcgcagcagctatagctatacaacttcttttgaagctcaagagatacttaaaagtcaca tatagcttaaatgatgaccggtgccaagcctattctccaacggaaccattgaagccagga gatcctctgtccagacaaagcgttgcctttgacctcagtgaaactcgcactgacttacct tcaacatatcaagacttagttcagagatatcaggagtttaagaacgcaatgagagaagat acggttgacttcaccatctattcatcaaacgtcaagagaaaacgcccaacgccaagaaaa acttcaagatctgctaaaaaaccagtggcctacaacgaagatgatgatgatgacgacgat gatgacagaggatggcatggaggaggaggaagaggagctgctcggagactgaattacagc accagaagtagcaacagaaggtaa

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