KEGG   Arabidopsis lyrata (lyrate rockcress): 9308041
Entry
9308041           CDS       T01578                                 
Name
(RefSeq) la-related protein 1A
  KO
K18757  la-related protein 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9308041
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     9308041
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 9308041
NCBI-ProteinID: XP_020877224
LinkDB
Position
Unknown
AA seq 833 aa
MMAETEGSVADDRELISCEGAIGTKSPWKTTASTAETIDAPVMGAHSWPALADAAQQPRP
KNPPPSAPAPAPPSKNIPTSIPIPSQAVAGQAKSKGGGKANNPGHKNPSGRHSKPGSRSN
QNGPPPPPPPPYLVHAVPYHPPSFPPMVPLPHAAAPDFPYAPYPPYPVPVPPVSDSGNEK
QVQASPLPPVLPPPQGDPGKPWPRQRGFDPRNMPQGGAGPRNFGRPPFMGPAPGFLVGPG
PGFPGPVYYLPGPPPGAIRGPYPPRFAPYPVNQGPPVLSPEKLDLRDRVLKQVEYYFSDE
NLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRD
KWSDWIPASKKSASVEKIGDSDKDSLESITSGDNFGNPSKGSSKPTASNFSSEGAQSSRT
NNYKSGNMKSSADEKRNVEDLSNDFSNTFLLDEELDLEHRSPRKSGLSMSKSIEYEDDDM
AVDDQDIQKLVIVTQNSGKSDGTGIGVTKAKNIPKELASTINDGLYYFEQELKKNRSGRR
KNNSHLDTKDGKIKSGVGLNTKLGENSAANEGGEEHGTITSRRKQNKGTHKHHTAHARRF
FSSNIRNHGNISESPPSSSIGFFFGSTPPDSHGPRLSKLSSSPQCTLSGSSPPVGSLPKS
FPPFQHPSHQLLEENGFKQEKYLKYRKRCLNERKKLGSGCSEEMNHLYRFWSYFLRDTFV
LSMYDDFQKFALEDAAGNYNYGLECLFRFYSYGLEKHFDEDLYKDFEKLSLDFYHKGNLY
GLEKYWAFHHYRGKKEPITKHPELEKLLKEEYRSIDDFRAKDTVTNQKENKSH
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgatggcggagactgaaggatcagtggccgatgatcgagaattgatcagctgcgaaggt
gctattgggactaagtctccgtggaaaacaacggcttctactgctgagactattgacgct
cctgttatgggagctcattcatggcctgcgctcgccgatgctgcgcaacaaccgcgtccc
aagaatcccccgccgtctgcacctgcacctgcaccgccgtctaaaaacattccgacatct
atcccaatcccttctcaggctgtagctggtcaagcgaaatctaagggtggtggaaaggct
aataatcctggacacaagaatccatctggccgtcattctaaaccaggctccaggagcaac
caaaatggtcctcctcctccacctcctcctccttatctcgtgcatgctgtaccatatcat
ccaccttcttttccacctatggtgcctctgccacatgctgctgctccagattttccatat
gctccttatcctccctacccggttcctgtacctcctgtttcggactctggcaatgagaag
caagttcaagcttcccctcttccacctgtgctgccacctcctcaaggggatcctggaaag
ccttggccgcgtcagaggggttttgaccccagaaacatgcctcaaggaggtgctgggcca
agaaatttcgggagacctccatttatgggtccagctcctgggttcctcgttggtccaggt
ccaggctttcctgggcctgtatactacttgccgggtccaccccctggagctataagaggt
ccttatcctccacgctttgctccataccctgtaaaccagggtcctccagtactatctcca
gaaaaactcgacttaagggatagagtcttaaaacaagtagagtattatttcagtgatgaa
aatcttgagaatgatcattacctcatttccttgatggatgaagaaggatgggttcccaca
aaaattatagctggcttcaaaagggttaaagcaatgaccatggatgttgattttattgtc
tatgcgttggggttttctaattctgttgaagtgcagggtgaccagatacgcaagcgtgac
aagtggtctgactggattcctgcatctaaaaagtcagcctctgtggagaaaattggtgac
agtgacaaagattccctagaaagtataacaagcggggataatttcggaaacccttcaaag
ggttcttcaaagcctaccgcgtccaatttctcttcagagggagctcagtcatcaagaacc
aataattataaaagtggtaacatgaaatcatcagcagacgaaaaaagaaatgtggaggac
ttgtcaaacgatttttcaaacactttcttgcttgacgaggaactagatctggagcacaga
agcccgagaaagagtggactgtccatgtccaaaagcattgagtatgaagacgatgatatg
gctgttgatgatcaagatattcagaaacttgtaattgttacccagaatagtggtaaaagc
gatggcactggaatcggtgtgacgaaagcaaaaaatatccctaaggagcttgcctccaca
ataaacgatggtctttactactttgagcaggagctaaaaaaaaatcgatctggccgtagg
aagaacaactcccatttggataccaaagatgggaaaatcaaatctggggtaggattgaac
acgaaattgggagaaaattcagcagcaaatgaaggaggggaagagcatggaaccattact
tctcggaggaagcaaaataagggaacgcacaaacatcatacagcccatgcacggaggttc
ttctcgagtaacataaggaaccatggaaatatatcagaaagtccgcctagtagctccatt
ggatttttctttggttctacaccaccagacagtcatggccctaggctttcgaaattgagt
tcatctccacaatgtacactttctggaagcagtccacctgtgggctctttgccaaaatca
tttccaccttttcaacatccgagccaccaactgttggaagagaatgggtttaaacaagaa
aagtacttgaagtatcgcaagcgctgcttaaacgaaagaaagaagctgggtagtggatgc
agtgaggaaatgaatcatttgtaccgattttggtcatatttcctcagagacacctttgtt
ctgtctatgtatgatgactttcagaagtttgctcttgaggatgcagctggcaattacaat
tatgggctggagtgtctctttcggttttatagttatggtctggagaagcactttgatgag
gacctttacaaggactttgagaagctatcacttgacttctaccacaagggaaatctgtat
ggcttggagaaatattgggcattccaccattatcgaggcaaaaaagaaccgataacaaag
caccctgagctagagaagctactgaaggaagaataccgtagcatagacgatttccgagca
aaggatacagtcaccaaccaaaaagaaaacaagtctcactga

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