Arabidopsis lyrata (lyrate rockcress): 9308179
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Entry
9308179 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase/endoribonuclease IRE1b
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_2-5A
Pkinase
PK_Tyr_Ser-Thr
Pkinase_fungal
PQQ
Coatomer_WDAD
Itfg2
Motif
Other DBs
NCBI-GeneID:
9308179
NCBI-ProteinID:
XP_020878168
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MRGSALLDLILFLLVSPLAHSFKGSEISKFYDKSISNQISQPDRESGYVLVSTVDGSISL
VDMSSQKLDWTFHTNEPIYSSYQAPHYHYTTDEERASALGDDFFMDCDKDWRLFNSSMRK
GKRVNEIVDASEFIGTLPYTSTDRIVLGKKDTSVFLLDWKTGKLVKRYRMDELYSNTVVE
NDKEKAIVLSKEAPILFGSGFKESEDLPELVYIERKDFKIQCISKFGDVLWSVSYAKMEA
KLQNHESVHLMGGLSSSDGIPIRTSWGKNHLPLSYTTSVPVVQLRNVNYETLFPRLGFLD
EALYLPFQDRKPNRLAPGDGKHLALPSNKEAEEVLSLPLPETVISQITDIIDGSTTQAGF
ASKFSGLIVLLFGFCVTMLSVCGIFFCRLRQGMWIKDPYVSEVPIAIPKKKKSKKNGTHK
KENGLISGGNKDPSNEENDKRLLTAFPGLNNNSSAEGYRVGKLFVSNKEIAKGSNGTVVL
EGSYEGRLVAVKRLVQSHHDVAQKEILNLMASDKHPNIVRWYGVDQDEHFIYISLERCAC
SLNDLIYASSALLESPVASSSIQPIQRNPIFENGKGVELWKENGHPSPVLLKLMSDIVAG
LVHLHDIGIVHRDLKPQNVLIVKNSSVCAKLSDMGISKRLPADTSALTRNSTGSGSSGWQ
APEQLRNERQTRAVDLFSLGCVLFFCMTAGKHPYGDNYERDVNVLNDRKDLFLIESLPEA
VHLLSGLLNPDPNLRPRAQEVLHHPLFWNSDMRLSFLRDASDRVELENREEGSQLLAALE
STAAVTLNGRWDEKLDSIFLDNIGRYRRYKFDSIRDLLRVIRNKLNHYRELPKELQELLG
SVPEGFERYFSSRFPKLLIQVYTVLFDYCNNEEFFFKYSKTTVF
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgagaggatctgcactacttgatttgattctgttcctgctcgtatctccattagcacac
agcttcaaaggatctgaaatctccaaattctatgacaaatccatttccaatcaaatctct
cagcccgatcgagaatctggttatgtattggtttctacggtagatggatcgatatctttg
gtggatatgtcctctcagaagctggattggacatttcataccaatgagccgatatattcg
tcttaccaagctcctcattatcattataccactgatgaggaacgtgcctcggcgcttggt
gatgactttttcatggattgtgataaggattggcgtcttttcaattcctctatgcggaaa
ggaaaacgcgtaaatgagatagtggatgcttcggagttcattggaacattgccatataca
tcgacggataggattgttttggggaaaaaggacacatctgtatttctcttggattggaag
actgggaagttagttaagaggtatagaatggacgagctatattctaatacagttgttgaa
aatgataaagagaaggctattgttttgtctaaagaagctccgatactatttggatcgggg
tttaaggaatcggaagatcttcctgagcttgtttacattgagagaaaagattttaaaatc
caatgtatatcaaagtttggagatgttttgtggagtgtttcttatgctaagatggaagct
aaactacaaaatcatgagagcgtacacctcatgggtgggttatcatcatcagatggtatt
cctattagaacttcttggggcaaaaaccatttaccgctatcctatacgacaagtgttcct
gtggtacagttacgtaatgttaactatgaaacactgtttccgagacttggttttctagac
gaggcgttgtatcttccatttcaagatagaaaacctaatcggttggctcctggagatggg
aaacacttggcacttccgagcaataaagaggctgaagaagtcctctcccttcctctgcct
gagactgtaatatctcagatcacagatattattgatggaagcactacacaggcaggcttt
gctagcaaattttctggtttgattgttctacttttcggcttttgtgttactatgctttct
gtttgcggcattttcttttgccgattaagacagggcatgtggatcaaggatccttatgta
tcggaagtgccaatcgcgataccaaagaagaaaaagtccaagaaaaatgggactcacaag
aaagagaacgggcttatatctggagggaacaaagatccctctaatgaagagaatgataag
agattacttactgctttccctggcctcaataataatagttcagcagaaggatatagggtt
ggtaaactgtttgtctccaacaaggagattgctaaagggagcaatggaactgttgtgctt
gagggatcctatgaaggtcgtcttgtagcggttaagcgtctagttcaatcacatcatgat
gtggctcagaaggagattttgaatctcatggcctcggacaaacatcctaatattgtccgc
tggtacggggttgaccaggacgaacattttatctatatttcattggaacggtgtgcttgt
agcttaaacgatctcatctatgcatcctctgcactgcttgagagtccagtggcttcaagt
agtatacaaccgattcagagaaacccaatctttgaaaatggcaagggagttgagctatgg
aaggaaaacggacatccgtctcctgttttgttgaagttaatgagtgatatagttgctggt
ctagttcatttgcatgatattggaatcgtacatcgagatctcaagcctcaaaatgtgttg
attgttaagaactcatctgtatgtgcaaagctgtcagatatgggcattagcaagcgcttg
ccagccgacacaagtgccttgactagaaactcaactggttctggaagttctgggtggcaa
gcacctgaacaactccgcaatgaacgacaaacaagagctgttgatctcttcagtttaggg
tgtgttctatttttctgtatgactgcaggtaaacatccttacggagacaattatgagagg
gacgtaaacgttttgaatgatcgaaaggatcttttcttgatcgagagtcttccagaagct
gttcatcttctctctggtctcctgaacccggatccaaatttgagaccgagagcacaagaa
gttctgcatcatccattgttctggaactctgacatgagactgtctttcctccgggatgca
agtgatagagtcgaattggaaaaccgagaggaaggctcacagctcttggctgcacttgaa
agcacagcagcggttacattaaacgggcggtgggatgagaaactggatagcatattccta
gacaatatcgggcgttacaggcggtacaagtttgacagcatccgcgatttgttacgggtc
ataaggaacaaactgaatcactatagagagcttccaaaagaattacaggaactacttggg
agtgtaccagaagggtttgagaggtacttctcaagcaggttcccgaaactgttgattcag
gtttatacagttttattcgattactgtaacaatgaagagttctttttcaagtactctaag
accactgtattctag
DBGET
integrated database retrieval system