Arabidopsis lyrata (lyrate rockcress): 9309637
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Entry
9309637 CDS
T01578
Name
(RefSeq) DDT domain-containing protein PTM isoform X1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDT
PHD
PHD_2
PTM_DIR17_Tudor
WHIM1
Motif
Other DBs
NCBI-GeneID:
9309637
NCBI-ProteinID:
XP_020876256
LinkDB
All DBs
Position
Unknown
AA seq
1599 aa
AA seq
DB search
MELVGKVVRKEIQGIGFCSGTVRSRDSSGFFEIVYENGVTEISELDEVVALVIGDGKSQE
NSVPVKKRVGRKPKKRSRVAKMVEIKRESSELDEVHVDLNDGVTEISGVSDVNLRGNVDL
NCGPVETLGRTCDSVTDLNMTVPQSETGFDLTTGLDWNSNEGLGLINVNIDYEDNCSDKR
RWDIDLNMDASCDLDNAAVCDFNGQKGEGGFDLNVEVDVENSKDGEYIQMNGNDIVQEIN
MQDGNVVHDNIETGEYKEVHVAEVSSAQLLEEIQKQNIVSPQDLNNPNSNGVEQDHELPQ
HDAKTVDESLSDRGNSDEYGSGRRKRRKPSDNPKFISEPRLRRSARRRLARSPVSSTVTA
CLVDEVSPSPSISSLTEEKTWVDGKAENISALPPKPQLPPSSHILDLDGLPVLDVFTTYS
CLRSFSTLLFLSPFELKDFVEALRCMSPSLLFDSIHVSVLQILRKHLKQLAAEGELSASA
CLRSLDWDTLDVVTYPLFVVEYLLFSGYKDNPGLDLTRLNFFRNEYFRQPMNLKIEILSR
LCDDMTDAEVVRSELNKRSFAAEFETELDRKTNTEVRRRKRTMMELADDLSFNNEVIDTS
FDRNSDDCCFCKMDGSLLCCDGCPAAYHSKCVGLASHLLPEGDWYCPECAFDRRVPGLKP
EKQIRGAEFIEIDPHGRKYYSSCGYLLVIDTDGTGSFNYYHVNDVNLVLEQLKSCSSSYT
GVVRAIKKHWDITVGPIRTISGVNSQMSVCLDKSVKEMIPSIDGFKAPLPASEKQSTSGA
KKKLNKASSNGWSHIHGPRTRRKILDSATGLDILNMSSEGSAETVQNGSDVQRLHEPASS
SILDIMKEPNMNSHNLARINTRKGIKPNVQSETGYRNHYIFAQMTRSVYEEMIRKSPIRT
NDMRSDEEIASTQVKTILMKTTKFQWRNIQSLYLDAWKEKCGWCHSCKSSSEDAGSEINC
LFNTSLGALRGLSESEVANIQSIEKNSHLLAIICQILSMESRLQGLLVGPWLNPQHSGIW
REHILKASNISGLKHLLVELEASLHHRVLSLEWLSHVDAAVVMGSAIHILIASTRSWSKT
AIGKRRGTLLESGVNPTAKKNGGLTMCWWRGGQLSRRLFNWKVLPRSLISKAARQGGSMS
IPGILYPENSESAKRSRRVAWEAAVESSTTSEQLGLQVRTLQSYIKWDDIENSHLLPTLD
KESRKSARLFKKAIVRRKCTEEETVKYLLDFGKRRNIPDVVSKNGCMVEESSSGRKKFWL
NESHVPLHLMKGFEEKKAVRKTSKPGGSFRHSEIHKLRKRSSEGKGFSYLFERAERSESS
LCEQCKKDLPLSEAASCHICKGVFHKKHIKRAEKEGMYICLPCRSEVIAKEQPTVRKRGR
PPGSFRKKIGVQTQKRKKVIPARKSPRLKKTKTSMAERIAIRLKNHKKVVASKPLRRSGR
QLKHVIRLQDESKVPEGSKKRKLETKRGRGRPKKVKQEISIRKKRTDRCLSYWLNGLLLS
RKADDERVHKFRKDRYYTPLENSDSDHDQPKCHLCGPIESESGSTFIACEICGEWYHGDA
YGLNEKNSSMVIGFRCHLCREQTSPTCPHMRSTTSPVAS
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atggagttggtgggtaaagtcgttcggaaggagatccaagggattgggttttgctccggg
acggttcgatctcgcgattcgtctggatttttcgagatcgtttatgagaacggagtcaca
gagatttcggaattggatgaggttgttgctctcgtgattggagatggtaaatctcaggag
aattcggttccagtgaagaagagagttggtaggaagccgaagaaacggtctcgtgtcgcg
aagatggttgagatcaagcgagaaagctctgagttggatgaggtacatgtcgatttaaat
gatggagttacggagatttcgggagttagtgatgtgaatttgagagggaatgttgatttg
aattgtggtcctgtggaaaccctaggtaggacatgtgactctgtgacggatttgaatatg
acggtgccgcaatcggaaactggctttgatctgactactgggttggattggaattccaat
gaaggtttaggtttgattaatgttaatatcgattatgaagacaattgtagtgacaaaagg
aggtgggatattgatctgaacatggatgcgagctgtgatttggacaatgctgctgtctgt
gatttcaatgggcagaagggggagggaggatttgatttgaacgtggaggttgatgtagag
aacagcaaggatggcgagtacattcaaatgaatggaaatgacattgttcaggaaatcaac
atgcaagacggaaatgttgtccatgataatattgagactggggaatataaagaagttcat
gttgctgaagtgtccagcgctcagcttttggaggagatacagaagcagaacattgtttca
ccgcaagatctcaataatcctaattctaatggggttgagcaagatcatgagctacctcag
catgatgctaagacggttgatgagtctctatctgataggggaaattcagatgaatatgga
agtggtaggaggaaaagaagaaaaccttctgacaatccaaaattcattagtgaacctcgg
ttgagaagaagcgctcgtagaaggttagctcgatctcctgtcagtagtactgtaacagcg
tgcttagttgatgaagtatccccttctccttcaattagtagtctgacagaggagaaaact
tgggtcgatggaaaagctgagaatatttctgccctcccgccaaagccacaattacctcca
tcctcccatattttggatttagatggtcttcccgtacttgatgtctttactacttactct
tgtctgcggtccttcagtactttgctgtttttgagtccctttgagctgaaagattttgtg
gaagcattgaggtgcatgtctcctagtctattatttgatagcatccatgtttctgtcttg
caaatattaagaaaacatttgaaacaactcgctgctgaaggtgaactatctgcgtctgct
tgcctgaggagtcttgattgggatacgttggatgtggttacataccccctttttgtggtt
gaatacctactattttctgggtacaaagacaaccctggattggatcttactcggttgaac
tttttcagaaacgagtatttcagacaacccatgaatctgaaaattgagatacttagtcgt
ttgtgcgatgatatgacagatgctgaagttgtgaggtcagagcttaataaaagatctttt
gcagctgagtttgaaacggaacttgataggaagacaaacacagaagttcgacgcagaaag
cgaactatgatggagctggcagatgatttatcttttaataacgaggtcattgatacctca
tttgaccggaacagtgacgactgctgtttttgtaaaatggatgggagcttactgtgctgt
gatggttgtccggctgcatatcattctaagtgtgtcggtcttgccagtcaccttttgcct
gagggtgactggtactgtcctgaatgtgcatttgatcggcgtgtaccaggattgaagcct
gaaaagcaaattcgaggcgcagagtttatagagattgatccccatggtcgaaaatactac
agcagttgtggctacttattggtgatagatacagatggcacaggctcatttaactactat
catgtgaatgatgtgaaccttgtgctggaacagctaaagtcatgcagtagttcctatact
ggcgtagtaagggcaattaaaaaacactgggatatcactgttgggccaataaggacaatc
agcggtgtgaattcccaaatgtctgtatgcctggataagtctgtcaaagaaatgattcct
tctattgatgggtttaaggctcctctaccagcttcagaaaaacagtcaacatctggtgct
aaaaaaaagctgaacaaagcatccagcaatggatggtcacatattcatggtcctaggact
cgtcggaagatattagattcagctactgggctagatatccttaatatgagttctgaagga
tctgctgaaactgtacaaaatggatcagacgtccagagacttcatgagccagcatcatca
agcattttggatatcatgaaagagccaaatatgaattcccataatttggctagaataaac
acacggaaaggaattaaaccaaatgtgcagagtgaaacaggctacagaaaccattacata
tttgctcagatgactagatcagtttatgaagagatgatacgtaagtcaccaatccgtacc
aatgatatgagatctgatgaagaaatagcttctacccaggtgaagactatattgatgaaa
accaccaaatttcaatggcgaaacatccaaagcctctacctagatgcgtggaaagaaaaa
tgtggatggtgtcattcctgcaaaagttcttctgaggatgctggtagtgagataaattgt
ttgtttaatacgagtcttggggctttacgaggtctttcggaaagtgaagtagctaacatt
caatccattgagaagaacagtcatcttttggccatcatatgccagatactttccatggaa
agtcgactgcaaggactcttggttggtccatggttgaatccgcagcactccggcatttgg
cgtgaacacattctgaaggcatcaaatatctcaggcttgaaacatttattggttgaatta
gaggcaagtttgcatcatcgtgtactttcacttgagtggctaagccatgtcgatgctgcc
gtggtaatgggatcagcaatacatattctcattgcttcgacacgatcatggtcaaagact
gctattggtaaaagaagggggacattgttggagtctggggttaaccctactgcaaagaaa
aatggtggattgaccatgtgttggtggagaggtgggcagctctctcggcggttattcaat
tggaaggttttacctcgctctttaatctcgaaggctgctagacaaggtggaagtatgagt
attccaggaatattgtatcctgagaattcagagtctgctaagagaagccgacgtgttgcc
tgggaagcagctgttgagtcatctacaacttcagagcagctcggtttgcaggtgaggaca
ctccaatcatacataaagtgggatgatattgaaaacagtcatcttcttcctacattagac
aaagaatccagaaaatctgccaggctattcaaaaaagcgattgtccgtaggaagtgcacg
gaggaagagactgtgaaatatctccttgactttggtaagaggagaaatattccggatgtt
gtgtcgaagaatggttgcatggttgaagaatcctcgagtggaagaaaaaagttctggctg
aatgaatcacatgtgcctttacatcttatgaaaggatttgaagagaaaaaagctgtacgg
aaaactagcaagccaggaggctctttcagacactctgagatacacaaattacggaaaagg
tcctcagagggaaaaggattctcatacctatttgaaagggcagaaagatctgaatcctct
ttgtgtgagcaatgtaagaaagatctgcctttgagtgaagctgcaagctgccacatctgc
aaaggagtatttcacaaaaagcatataaagagggcagagaaggagggcatgtacatctgt
cttccatgcagaagtgaagtgatagcaaaagaacaacccaccgtacgaaaaagagggcgg
ccgccagggagtttccggaaaaaaattggagttcagacacaaaagcgtaaaaaggtcata
cctgctcgcaaatcacctcggctaaagaagactaagacctcgatggcagagagaattgcc
ataaggttaaagaatcataaaaaggttgttgcaagcaaaccattgcgacgttctggcagg
caattgaagcatgttattcggctgcaggatgaaagtaaagttcctgaagggagtaagaaa
cggaaactggaaaccaaaagaggtagaggcagacctaagaaagtaaaacaagagatctcc
attagaaagaagagaacagataggtgtttgagctattggttgaatggcctccttttgtcc
agaaaggctgacgatgaacgggttcataagttccggaaagatagatattatactcccttg
gagaactctgattctgatcatgatcaacctaagtgtcacttatgtggcccaattgaatct
gaatctggatcaactttcattgcttgcgaaatctgtggagaatggtaccacggagatgct
tatgggcttaacgaaaagaattcaagtatggtgattggattccggtgccatctctgtcgc
gaacaaacttctcccacttgtccacatatgagatctactacatcacctgttgcatcctaa
DBGET
integrated database retrieval system
