Arabidopsis lyrata (lyrate rockcress): 9311765
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Entry
9311765 CDS
T01578
Name
(RefSeq) DDT domain-containing protein PTM
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDT
PTM_DIR17_Tudor
PHD
WHIM1
Motif
Other DBs
NCBI-GeneID:
9311765
NCBI-ProteinID:
XP_002875697
UniProt:
D7LNH7
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MEAKVPRPRGRPRKRQRLEDDNRKSNNRGKKQVLEVEPAVPISLLGSYVLKDFDDNGVFL
GKIVSYDTGLYSVVYEDGDSEELESGDLRRLIIADSYLDNELRVRRNKLDKLILKEEKKK
RNSPENKVVELPNQVNGEKAPAVTKSNSQAKVEDGDSYSDSDLSESENKRGSDLDTEAPI
VLPVDLPPSSGTIGIPEEAVAHLLSVYGFLRSFSFQLYICPFELNDFVGALNFPGPNSLL
DAVHVALMRALKGHLERLSSDESVLASKCLRCIDWSLLDVLTWPVYLVQYFTAMGNVSGP
QWNIFNKFVVEKEYYSLPIGMKLKILQILCDDIFDVADLRDEIDAREESEIGFDPDRVAT
GLPENVPRRVHPRFAKTSAYKDKGVIDSSTNESKDLDSRCTEGGANEVSSDLDGNSDECR
ICGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWFCPECTINKKGPKIAHGTSLRGAVQ
FGMDPHGRLFLGTCNHLLVLNISVNGDAVVKYYNVNDISKVVLVLLSASNHALEYLEICK
AITQYWDLPGGMISLREGETGLAQAKDREDGKVTEMTKSDSANISSRNHTQTVFDLPAST
LGNIDNAVTGGSSGIQGKKLATGVTYLGLSFKPHTYNNHYTNGELAVSAAASLAVLSSEE
THEPDLRKYNSARKAASSNILVQMKAFSLVASRFFWPSPDKKEITRERCGWCHSCKLTSA
SRRGCMLNAAVTGATKGAMKIFSGLFPLKNGEGVLSSIAAYILYLEESLRGLIAGPFLSE
SPRKQWRKQVEEASTCKALKALLLELEENICSIALSSDWFKLMDDWLVEHSIFQSAPVTV
GVTQKRGPGRRKQRTQAEVTAEGSDDDSFTWWRGGKLSKVILLKAVLSQPAIRKAAWQGG
SQKIPGFNYGDASYIPRRSRRSIWKAAVESSKNISQLALQVRYLDMNLRWSELVRPEQNL
QDVKGPETDVAIFRNARICDKKLSDNKVSYGVFFGNQKHLPSRVMKNVIEVEKTQDGNEK
YWFQEARVPLYLIKEFEESLHRVQMPSSTKKPSNKLSKLQRKQLKASRMDIFSYIASRRD
KMEKCSCASCDHDVLLRDTTTCSSCQGFCHKECTWMSQHTNGKVEVLVTCKRCYLAKNRV
PANINHRQSTTPQLTINGRHQNAVTPVIKIKPPSQQINGRPQNAVTPVIKIKPPSQQLPS
QKPRENTSGVKQITPESTVKSKSKQKTLSCGVIWRKKNVEDTGVDFRNQNILLAGRSDQS
SLEPVCGICLQPYNPGLTYIHCTKCEKWFHTEAVKLQDSQIPEVVGFKCCKCRRIRSPDC
PYMDPKLMEQKQIKRIVFKNQKQRQGNSGLDSDSERMSEQKDSKPSTPLPVTPLYPPEDV
FIPDDDPLLVSVSKVEHITPSSFDLEWSTAAFAPGSQKLPVRRQVKREDSNAGYPELQPI
VKPEADEQALPVLTEWDSSGELLFDYEDMEFEPQTYFSLTELLTADDSGGGQYEINGDKI
VSGNPHFEPTEEEECEDMGPCQRCSQMDPAPDLLCTVCGLLIHSHCSPWEEDPSALPGSS
WSCGQCREWQ
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgaaggttcctagacctaggggaagaccgaggaaacgtcagagattagaggat
gataatcgaaaatcgaacaatcgagggaagaagcaggttttggaggtggagccggcggtg
ccgatatccttacttggtagttatgtgctgaaagattttgatgacaatggagtttttctt
gggaagatagtgtcttatgatactgggttatatagtgtggtgtatgaggatggtgattct
gaggaattggagagtggtgatcttcgtcgtttaattattgcggatagttacttggacaat
gagttacgtgttagaaggaataaattagataaacttatactgaaggaggagaaaaagaaa
agaaattccccggagaacaaagtggttgagttgccaaatcaagtaaatggagagaaggca
ccagcagttacgaaatcaaattctcaagcaaaagttgaagatggtgattcatatagtgac
tcagatttgtctgagagtgaaaataagagaggttcagatcttgacactgaggctcctatt
gttctaccggtggatttacctccttcatcggggacaattggtattccagaggaggctgtg
gcacatctcttatctgtatacgggttcttaaggtcatttagttttcagctatatatctgc
ccatttgaactcaatgattttgtgggagcgttgaatttcccgggaccaaattctttgttg
gatgctgttcatgtggccttgatgcgggcgttgaagggtcatcttgagagactttcctca
gacgagtctgtcctggcttcaaaatgcttgaggtgcattgattggagcttgctcgatgtg
ctaacttggcctgtttatttggttcagtactttactgcgatggggaatgttagtgggcct
cagtggaacatttttaataaatttgttgtggaaaaggagtactactccttacccattggg
atgaaattgaagatcctacaaattctctgtgatgacatctttgatgtagcagatctaaga
gacgaaatagatgctcgcgaagaatctgaaattggatttgatcctgatagagttgccaca
ggtcttcctgaaaatgtacctagacgggtccaccccagattcgctaaaacctcagcttac
aaggataaaggggttattgatagctcaacaaacgagtctaaagatttggattcaagatgt
actgaagggggtgcaaatgaagttagctcagatctagatggaaacagcgatgaatgtagg
atttgtggaatggatggaaccttgctttgttgtgatggatgtcctttagcatatcactca
agatgcattggtgtggtcaaaatgtatataccagacgggccatggttttgtccagagtgc
actattaacaaaaaggggccgaagattgctcatggaacctcacttagaggagctgtacag
tttggaatggatccacatgggcgactattcttgggtacttgcaatcacttactggtgctt
aacatatctgtcaatggagatgcagttgtcaagtactacaatgtcaatgacatatcaaaa
gttgtactagtgcttttatctgcatcaaaccatgcactagaatatctagagatttgcaaa
gcgatcacccaatactgggatcttcctggaggtatgatctccttgagggaaggggagact
ggtttagctcaagcaaaagatagagaggatggcaaggttacagagatgactaagtcagat
agtgcaaatatttccagtagaaatcatacccagactgtgtttgacctcccggcatctact
ttgggtaatatcgacaatgctgttacaggaggttcaagtggaatacaggggaagaaattg
gctactggggttacctacttgggtttatcgtttaaaccccacacatacaacaatcattac
acaaatggagaattggctgtatctgctgctgccagtttggctgtcctatcgtcagaggaa
acccatgaacctgaccttcgcaagtacaatagtgccaggaaagctgcatcaagtaacatc
ttagtgcagatgaaagcattttcattagtagcctcacgtttcttctggccaagtcctgat
aagaaggagattaccagggaaagatgtggttggtgtcattcttgcaaactcacatctgca
agcaggagaggttgcatgttaaatgcagctgtaacgggtgccactaagggtgcaatgaag
atcttcagtggtctttttcctctaaagaatggggagggagtgctttcaagtattgcagca
tatattctatacctagaggaaagcttgcgtggtctgattgctggcccatttctcagtgaa
agtcccagaaaacagtggcgtaagcaggtagaggaagcctcaacatgcaaagccctaaaa
gcactcctacttgaacttgaggaaaatatttgcagtattgctctgtcaagcgattggttt
aaactgatggatgactggttggtagaacattctattttccaaagtgctccagttactgtt
ggggttacacagaaacgtggacctggtaggaggaagcaaaggacccaggctgaagttaca
gctgaaggttccgacgatgatagctttacatggtggcgaggagggaagttatcaaaagtt
attttattgaaagcagttttgtcacaaccggcaataaggaaagcagcttggcaagggggt
tctcaaaagattcctggatttaattatggtgatgcttcttacatccctaggagaagcaga
cggtctatttggaaagctgctgttgaaagtagcaagaacatatctcagctcgctcttcag
gtaagatatctagatatgaatttaaggtggagtgaacttgtacggccagagcaaaatctc
caggatgtcaaaggcccagagacagatgttgccatttttagaaatgctcgtatatgtgac
aaaaagcttagtgataacaaggttagctacggagttttctttggaaatcaaaagcatctg
ccatcacgcgtcatgaagaatgtaattgaggtcgagaaaacccaagatggaaatgaaaag
tattggttccaagaagcccgtgtccccctatatttgatcaaagaatttgaagagagtttg
catagagtacaaatgccttcttcaaccaagaagccgtccaataaattatcaaagcttcag
agaaagcagctgaaagcttcccgcatggacatattttcatatatagcctcaaggagggac
aagatggagaaatgttcttgtgcatcatgtgatcatgatgttctattgcgggatacaaca
acgtgcagttcttgccaaggattttgtcacaaggagtgcacttggatgtcacaacacaca
aatggaaaagttgaagttctggtcacctgcaaacggtgttaccttgcaaaaaatcgagtt
ccagcaaatatcaatcacagacaatcgacaacaccccagctcacgatcaacggacgacat
caaaatgcagtcactccagtcatcaagattaagcctcctagtcaacagatcaacggacga
cctcaaaatgcagtcactccagtcatcaagatcaagcctcctagtcaacaattaccatcc
cagaaaccacgggagaacacttcgggagttaaacaaatcactcctgaatctactgtgaaa
tccaagagtaaacaaaagacactgtcctgtggagtcatatggaggaaaaagaatgtggag
gacactggtgttgatttccggaatcaaaacattctcttggctggaagatcagatcaatcg
agtctggaaccggtttgtgggatctgcctacagccatacaatcctggtttaacgtatatt
cactgtacaaaatgtgaaaagtggttccacactgaagctgttaagctccaggattcacaa
attcctgaagttgttgggttcaaatgttgcaaatgtcgacgtatacgatcccccgattgc
ccttacatggatcccaaactcatggaacagaagcagatcaaaagaatagtcttcaagaac
cagaaacagaggcaaggaaattccgggttggattctgattctgaaagaatgtctgaacaa
aaagactcgaaaccttctactcccttacctgtcactcctttatatcctcctgaagacgta
tttattccagatgatgatcctctcctggtctcagtttccaaagtcgaacatataacaccc
agtagtttcgatcttgaatggagcaccgctgcttttgcgcctggatcccaaaagctacca
gttagaaggcaagtgaaacgagaagattctaatgcaggctatcctgaactgcagcctatt
gtgaaacccgaggcagatgagcaagctttacctgttctaacagaatgggattcgtctggt
gagctactattcgactacgaggacatggaatttgaaccacaaacttatttctcgttgacc
gagctactgacagccgatgatagtggtggtggtcagtacgagataaatggcgataagatt
gtttcaggaaaccctcacttcgaaccaacagaagaagaagagtgtgaagatatgggtcca
tgtcagagatgttcgcaaatggatccagcgcctgatcttttgtgcacggtttgtggattg
ctaatacattctcactgttctccatgggaggaagatccatcagcgttacccggaagtagc
tggagctgcggtcaatgccgtgagtggcagtag
DBGET
integrated database retrieval system
