Arabidopsis lyrata (lyrate rockcress): 9312139
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Entry
9312139 CDS
T01578
Name
(RefSeq) zinc finger CCCH domain-containing protein 44
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
SWIB
GYF
zf-CCCH
zf-CCCH_2
GYF_2
zf-HC5HC2H
zf_CCCH_4
Torus
zf-CCCH_4
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
9312139
NCBI-ProteinID:
XP_020880063
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MDNQQKQLQQGVPELASLAGREESSVRGIDLMRVDQCEEIGVNQVPALSVPALSVAGTVA
VPVSIEQEVKVVDEVAPVKRKRGRPPRAQAKTPLHIRPPPPPPRKDDKEEDVCFICFDGG
DLVLCDRRNCPKAYHPACIKRDEAFFRTTAKWNCGWHICGTCQKASSYMCYTCTFSVCKR
CIKDADYVIVRGNMGLCGTCIKPIMLIENIAQGDNEAVKVDFDDKLSWEYLFKVYWLSLK
EDLSLTVDELTKANNPWKEVPNTAPNVESRNDHTNNRALDVAVNGTKRRKTSDSPTLPNK
LDGKNSNNILKKAPRDTSWATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDP
LQKSQVLCDLMLVKLFGKQRVGHFEMLKLLESHVLIQEKPKGDKTTNGETTHAVPSQIEE
DSVHDPAVRDRRRKMRRKTDGRVQNENLDAYAAIDVHNINLIYLRRKFLESLLDDINKVH
EKVVGTILRIKVSGSDQKVDIHRLVQVVGTSKATASYQLGAKTTDVMLEILNLDKREVIS
IDQLSDQNITEDECKRLRQSIKCGLNKRLTVGDILKTAATLQAMRTNEALEAEILKLNHL
RDRASEKGHRKELRECVEKLELLKSPDERQRLLQEVPEVHTDPSMDPSHASSSDAGLGTT
KQDNHIKAQSKGPQNKGAILNNVGNNAQKKYDAPILRSRNVVHADKDDCSKVHNNSSSIQ
ETGKDDEESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWRAHENQDESVLLTD
ALAGRFDKATTLPSSALLPQEQKPFPHDSGRTGVDVNCLQKNQTPVNTSATSSSSSTVTA
HSNDPKEKQVVALVVCSGKVEDGNSVCPQSQVSCPASMSVVPGHVVSPDVRQTPGTDQSN
AVRADGNHNTTKTLDDGTNGGSAINGSVQAPNLNQESHFLDFPSPTPKSSPEDLEAQAAE
TIQSLSSCVLVKGPSGVTWSTTTTATTDAATTTSSVVITGGQLPQVTQQNAVVLAAPSVK
PIDLAADHATATQTSDNTQVAQASGWPAIVADPDECDESVSDLLAEVEAMEQNGLPSSPT
STFHCDDDDDLTKGPEKDFFNPVARMSLTPETCRLDVSQASILDNVSAGKNSMGTEAKDN
TPFSHFGTAGPELLLFAPPAPAPTSISHDLTLTTTALRLGSETTVEAGSVERFPKSVLGV
SSEPSPRSFISHDSGSARGNTERSPRGSQQKRSNGHSRDRQWLNNSHNSSFNNSHNNRQW
PYSNSHGYDHGSGSYAAHPPKGLKICKFYESGYCKRGASCSFWHP
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaacagaagcaactccagcaaggcgtgccggagttggcttctttggctggt
cgcgaagagagttccgtcagagggatcgatcttatgagagttgatcaatgtgaagagatc
ggtgttaaccaagttcctgctctctctgtacctgccttgtcggtggctgggacggttgct
gtgcctgtgtccattgagcaagaggttaaagttgttgatgaagttgcccctgtgaaacga
aaacggggtcgtcctcctagggcacaggctaagacgccgttgcatattcggccacccccg
ccgccgccgcggaaggacgacaaagaagaagatgtttgcttcatttgcttcgacggtgga
gaccttgttctctgcgatcgccggaattgccccaaggcataccatccagcttgtattaag
agagatgaggcattcttccgaacaacggctaaatggaattgtggttggcacatatgtggt
acatgccaaaaggcttccagttacatgtgttatacctgcactttttccgtttgtaagcgg
tgcattaaagatgctgactatgtgattgtgagaggtaacatgggtctttgtggcacatgt
attaagcctataatgctgattgagaatattgctcaaggagataatgaagcagttaaggtg
gattttgatgacaagcttagttgggaatatctattcaaggtatattggctttccctgaag
gaagatctatctctaactgtcgatgagcttactaaagcaaataatccttggaaggaggtt
cctaacactgctcctaacgtggagtcacgaaatgatcataccaataacagagctttagat
gtagcagtgaatggaacaaaaagaagaaagaccagtgattcccccaccttacccaacaag
ttggatggcaaaaattcaaataatatcctaaagaaggctcctagagatacgagctgggca
acaaaagaactcctcgagtttgtgtcgttcatgaaaaatggcgatacatctgttctatct
cagtttgacgtgcagggtcttctgcttgactatatcaagaagaaaaatcttagggatcct
cttcagaagtctcaagttctttgtgacctgatgcttgtgaagttgtttggaaaacagcga
gtgggtcactttgaaatgcttaagcttctcgagtctcacgtccttattcaagagaaaccg
aaaggtgataagaccacaaatggtgaaactactcatgccgtacctagccaaatagaggag
gatagtgttcatgatccagcggtcagggatagaagacgtaagatgcgcaggaaaactgat
ggcagagtacaaaatgaaaatttggatgcatatgcagccattgatgttcacaatatcaat
ctgatttatttgagacgtaaatttttggagtctctacttgatgatatcaacaaagttcac
gaaaaggtggtaggcacaattttgagaatcaaggtatctggcagcgaccagaaggtggat
attcacaggcttgttcaagttgtaggtacaagcaaggcaacagcatcctaccaacttggc
gcaaagactacagatgttatgctagaaatactgaatttagacaagagagaagtcatctcg
attgatcaattatcagaccagaatatcacagaggatgagtgcaaacggctgcgccagagc
ataaaatgtggcctcaataaacgtttgactgtgggtgacatcttgaagacagcagcaaca
ctgcaagccatgagaaccaatgaggctctggaagctgagatattaaagctcaatcatctc
cgtgatcgggccagtgagaagggtcatagaaaggagcttagagaatgtgtagaaaagctg
gagcttctaaaatcacctgatgaacgtcagcggcttctgcaggaagtcccagaagttcat
acagatccaagcatggatccgagtcatgcatcatcatcagatgcagggttgggtacaaca
aaacaagataatcacataaaggcacaaagtaaaggtccgcagaataaaggggctatcttg
aacaacgtaggaaataatgcgcagaaaaaatatgatgcaccaattttgcgaagcagaaat
gttgtgcatgctgataaagatgattgttctaaggtccacaacaactcatcaagtatccag
gaaactggtaaagatgacgaggagagtgaaatatggcattatcgagatccaacaggaaag
acccagggaccgttttctatggtgcagctccgtagatggaaatctagtggccattttccc
ccttatcttaggatatggagagcgcatgagaaccaagacgagtctgtgcttctgactgat
gctcttgctggacggtttgataaagcaactactttgccaagttctgctttgcttccccaa
gaacaaaaaccatttccgcacgattctggccgcactggcgtggatgtgaactgtcttcag
aagaaccagacgccagttaacaccagtgcaacctcctcttcctcctctactgtcactgcc
cattctaacgatcctaaagagaaacaagttgtggctcttgtagtttgctctggaaaagtc
gaggatggtaattctgtttgtccccagtctcaagttagttgtccggcgtcaatgtctgtg
gttcctggacacgttgttagtcctgatgtaagacaaactccaggaactgatcaatccaat
gctgtgcgggcagatggtaaccataacacaactaagactctggatgatggaacaaatggt
ggttctgccataaacggttctgttcaggcaccaaacctgaatcaagaaagccatttcctt
gatttccctagtcctacacctaagtcgagccctgaggacttggaagctcaagcggcagag
actattcagtctctgtcttcatgtgttctggtcaaaggaccatctggtgtcacttggagc
accacaacaacagctaccaccgatgctgctactaccacttcaagtgttgtgatcactgga
ggacagcttcctcaagtaactcagcagaatgctgttgttttagctgcaccgtctgtaaag
ccaattgatttggcagctgatcacgccacagctacgcagacttcagacaacacccaagtg
gctcaagcatctgggtggccggccattgtggctgaccctgacgagtgtgatgaatcagtt
tcagatttattagctgaagttgaagcaatggagcagaacggtcttccctcttcacccacc
tcaacgtttcactgtgatgatgatgatgatttgacaaaagggccagagaaagatttcttt
aaccccgtggcacgcatgtccctgacacctgaaacatgtagattggatgtctctcaggcg
agtattctcgacaatgtctctgccgggaaaaactcaatgggtacagaagcaaaagacaac
acacccttcagccacttcggaaccgctggtccagagctcctgctttttgcaccaccagcg
ccagcgccaacttcaataagtcacgacctgactctaacgacaacggctctcagactagga
tcagaaaccacagttgaagctggatcggtcgagaggttccccaaatctgttttgggagta
agttcggaaccaagccctaggtcatttatatctcatgactcaggctcagcccgtggaaac
accgagcgaagtccacgagggagccagcagaagagatccaacgggcacagcagagaccgg
cagtggttgaacaacagtcacaacagtagcttcaacaacagtcataataaccgtcaatgg
ccatacagcaacagccatgggtatgaccatggatcaggttcgtacgcagctcatccgccc
aaagggctgaaaatctgtaaattctatgagagtggatactgcaaaagaggtgcatcttgt
agtttttggcacccctga
DBGET
integrated database retrieval system
