Arabidopsis lyrata (lyrate rockcress): 9314882
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Entry
9314882 CDS
T01578
Name
(RefSeq) serine/threonine-protein kinase RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9314882
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aly01001
]
9314882
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9314882
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
9314882
Protein kinases [BR:
aly01001
]
Serine/threonine kinases: Other
RIO family [OT]
9314882
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-40S particles
Kinases
9314882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIO1
ABC1
Pkinase_fungal
CCDC106
Motif
Other DBs
NCBI-GeneID:
9314882
NCBI-ProteinID:
XP_002878815
UniProt:
D7LJI1
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MEEVVVAAEPPPTIPPVVEYEEEIEEDDDDDDLSLSSDSDIAEALDWLDGKDDDELIGGG
FSLHARRPNAHGGHGSRPNSSALQPISNKAQKLTSHVRASPLEGWEGRVNVGMSNSVTTA
IRGSLRETEIGRSRNTDKADRATVEQALDPRTRMVLFRMLNRGVFNDVNGCISTGKEANV
YHATKSDGSELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCRHNPRKMVKTWAEKEQRNL
KRLHAAGIRCPAVILLRLHVLVMEFIGRDGWAAPRLKDAALSLDKLRECYLELIIQMRVL
YQKCKLVHGDLSEYNILYFEGHLYIIDVSQSVDLDHPLALNFLREDCDHVSDFFKKHGVA
VMTIRELFDFIVDPTISDENVDSYLEEVQRKVIERGEISVEDEIADSVFMKSYIPKSLDA
VNNPEADVAKITSGQDTGDMLYQTITGLKDALPKVEEQQKEVNAAEEEEEEEEEEDGESE
EESEEELGPEDKKAARKEHKKKVKEEKRESRKTKTPKSVKKRKKKVSKPHKTR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagtggtagcagcagagccaccaccgacgattcctccggttgtggaatac
gaagaggagattgaagaagatgacgacgacgacgatctctctctttcgtcagattccgat
atcgctgaagctcttgattggctagatggtaaagacgatgacgagctaatcggtggtggc
ttctctcttcatgctcgtcgtcctaatgctcacggtggacatggttcacgtcctaactct
agtgctcttcagcctatatcaaataaggcacaaaagcttactagtcatgttcgtgcttct
cctttggagggatgggaaggaagagttaacgttgggatgtcgaattctgtgacaactgcg
attcgtggaagtcttagagagacagagattgggagaagtaggaatactgataaagccgac
cgggcaaccgttgaacaggctcttgatccaaggacgcgtatggttttgtttagaatgctt
aatcggggtgtgtttaacgatgttaatggctgtatttcgacaggcaaagaagctaatgtt
tatcatgccacaaaatctgacggttcggaacttgcaataaaagtgtacaagacatcagtt
ttggttttcaaggatcgagatcgatatgtacaaggagattaccgttttagatatggctac
tgtcgccacaatccccggaagatggttaagacgtgggctgaaaaagaacagagaaatctt
aagaggcttcatgcagcaggaattaggtgtccagctgttatacttctacgccttcatgtt
ctagtcatggagtttatagggagggatggttgggctgcaccgcgtctcaaggatgccgca
ttatcactggacaagttgcgggagtgttacctagagttgataattcaaatgcgagtatta
tatcagaagtgcaaattggtccatggggatctcagcgagtataacatactttattttgag
gggcacctttatataattgatgtttctcaatctgtggatctggaccatcctcttgcactc
aactttctacgggaagattgtgaccacgtctctgattttttcaagaaacatggtgtggct
gtcatgacaatacgggagctatttgacttcattgttgacccgacaatttcagacgaaaat
gttgatagctatttggaagaggtccaacgaaaagttatagagcgaggagagatatccgta
gaggatgaaatcgcggattcagtattcatgaagtcatacataccaaaatctctggatgct
gtgaacaacccggaggctgacgtggcgaagataacaagcgggcaggacacaggagacatg
ctgtaccaaacgataacggggctaaaagatgctcttcccaaagtagaagagcagcaaaaa
gaggtgaatgctgcagaggaagaagaggaggaagaagaagaagaagacggagaaagcgaa
gaagagagtgaagaggaattgggtcctgaagacaagaaagctgcaaggaaagagcacaag
aagaaagtgaaagaggagaaacgagagtctaggaagacgaaaacacccaaatctgtcaag
aagcgaaagaagaaagtctctaaacctcacaagactcgttaa
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