Arabidopsis lyrata (lyrate rockcress): 9317321
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Entry
9317321 CDS
T01578
Name
(RefSeq) protein argonaute 6
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9317321
03036 Chromosome and associated proteins [BR:
aly03036
]
9317321
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9317321
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9317321
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9317321
microRNA pathway
RISC loading complex
9317321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9317321
NCBI-ProteinID:
XP_002881254
UniProt:
D7LFN4
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MEKSSSLPLSPISIELEKPSHRDYDITTRRGVGTTGNPIELCTNHFNVSVRQPDVVFYQY
TVSITSENGDAVDGKGISRKLMDQLFKTYSSDLDGKRLAYDGEKTLYTVGPLPQNNFDFQ
VILEGSFSKRDCSVSDGGSPSGTCKRSKRSFLPRSYKVQIHFAAKIPLKTILVTQRGSYT
ADKSAQDALRVLDIVLRQQAAERGCLLVRQAFFHSDGHPMEVGGGVKGIRGFHSSFRPTH
GGLSLNIDVSTTIILEPGPVLEFLKANQSVETPRQIDWVKAAKMLKHMRVKATHRNMEFK
IIGLSQKPCNQQLFSMKIKDGEREGQTRDITVYDYFKQTYTEPISSAYLPCLDVGKPNRP
NYLPLEFCNLVSLQRYTKALSGRQRALLVEKSRQKPLERIKTLNDAMHTYCFDKDPFLAG
CGISIEKQMTQVEGRVLKPPMLKFGKNEDFEPCNGRWNFNNKMLLEPKAIKNWAIVNFSF
PCDSSHISRELISCGMRKGIEIDRPFALVEEDPQYKKAAPVERVEKMIAKMKLKFPDPPH
FILCVLPERKTSDIYGPWKKICLTEEGIHTQCICPVKISDQYLTNVLLKINSKLGGINSL
LGIEYSYNIPLINKIPTLILGMDVSHGSPGRADVPSVAAVVGSKCWPLISRYRAAARTQS
PRLEMIDSLFQPIENTEKGDNGIMNELFVEFYRTSRSRKPKQIIIFRDGVSESQFNQVLN
IEVDQIIKAYQRLGESDVPKFTVIVAQKNHHTKLFKAKGPENVPAGTVVDTKIVHPTNYD
FYMCAHAGIIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAH
LAAAQFAKFEDVSEDGKVPELPRLHENVETNMFFCFC
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcttcatctctgccactgtcacccataagtatagaactagaaaagcccagc
catcgagattatgacatcacaactagacgtggggttggaaccacaggcaacccaatagaa
ttgtgcaccaatcactttaatgtttctgtgagacagccggatgtagtattttaccagtac
actgttagtatcacctcagaaaatggtgatgctgtcgatgggaaaggaataagcagaaag
cttatggaccaactattcaagacttactcttctgaccttgatggtaaaaggttggcatat
gatggagagaagactttatatactgttggtcctctgccacagaacaactttgactttcaa
gtcatcttggaaggttcattttcaaaacgtgattgtagtgtctctgatggtggtagtcct
tccggtacttgcaagagatcaaaacgttctttcttgccaagaagttacaaggttcagata
cactttgctgcaaaaataccgttgaagactattcttgtcactcagagaggatcttataca
gcagataagagtgctcaggatgcacttagagtgcttgacattgtactgaggcagcaagca
gctgaaaggggatgccttttggtcaggcaggcttttttccatagcgatggccaccccatg
gaagttggaggaggtgtaaaaggtattcgaggtttccattcgagctttcgtccaacccat
ggaggactctcgcttaacattgatgtgtcaacaacaataatcttagaaccgggtccagtt
cttgaattcctgaaagccaatcagagtgttgagacaccacgacaaatcgactgggttaag
gctgcgaaaatgcttaaacatatgagggtaaaggcaacacaccgtaacatggaatttaaa
attataggtctaagtcagaaaccgtgcaatcagcaactgttttcgatgaagattaaagat
ggtgaacgtgaaggacagactagagatattacagtgtatgactatttcaagcaaacttac
acagaacctatttcttctgcgtacttgccatgccttgatgttggcaagccaaatcgcccc
aactatcttccactggagttttgtaatcttgtatctctgcaacgttatacaaaagcattg
tccggaaggcaaagagctctacttgttgaaaaatcaagacaaaaacctcttgagagaatt
aagacactcaatgatgcaatgcatacctactgctttgacaaggacccatttttggctgga
tgtgggatctccattgaaaaacaaatgactcaagttgaaggccgggttctcaagccccca
atgctgaagtttggcaagaatgaagattttgaaccttgcaacggacggtggaactttaac
aacaagatgcttctggagccaaaagctattaaaaactgggctattgtcaacttttctttt
ccatgcgacagtagtcacatttcccgtgagcttataagctgtggcatgaggaaaggcatt
gaaattgatcgaccttttgcactagttgaagaggatccacagtataaaaaagcagctcct
gttgaaagggtagaaaagatgattgcaaagatgaagctaaaatttccagatcctcctcat
tttatcctctgtgtcctgccagaacggaaaacttctgatatctatggtccctggaagaag
atatgcctcactgaagaagggatccacacacaatgcatctgccctgtcaagatcagtgac
caatatctcaccaatgtacttctgaagattaattcaaagcttggaggcatcaattctttg
ttgggaatagagtactcttacaacattccattgataaacaaaattcccaccttgattttg
ggtatggatgtatctcatgggtctccaggtcgggcagatgttccttcagtagcagcggtt
gttggttcaaaatgctggcccttaatctcaaggtatagggcagctgcaagaactcagtca
ccacgtctggagatgattgattcgctcttccaacctatcgagaacactgagaaaggagat
aacggtattatgaacgaattatttgtagagttctaccggacaagcaggtcacggaagcct
aagcagattatcattttcagggatggtgtgagtgaatcacagttcaaccaagtcttgaac
atcgaggtggaccaaattataaaggcgtatcaacgtcttggtgaatctgatgtgccaaaa
ttcactgtcattgtggctcagaagaaccaccacaccaagttgtttaaagctaagggtcct
gaaaatgttcctgcaggaactgttgtggacaccaagatcgtacacccgacaaactacgat
ttttacatgtgtgctcatgcaggaataataggaacttcaagaccggctcattaccatgta
ttacttgatgagattggtttctcccccgatgacttgcagaatctcatccattctctctcc
tatgtcaaccaacgtagcacaactgcaacttcgattgtggctccagtgcgatacgctcat
cttgcagcagctcaatttgctaagtttgaagatgtatcggaggacgggaaagttccagag
cttccacgtctgcacgagaatgtggaaaccaacatgttcttctgcttctgctga
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integrated database retrieval system
