Arabidopsis lyrata (lyrate rockcress): 9320260
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Entry
9320260 CDS
T01578
Name
(RefSeq) WD repeat-containing protein 70
KO
K24752
WD repeat-containing protein 70
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9320260
03036 Chromosome and associated proteins [BR:
aly03036
]
9320260
03400 DNA repair and recombination proteins [BR:
aly03400
]
9320260
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
9320260
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
9320260
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
9320260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
eIF2A
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
9320260
NCBI-ProteinID:
XP_002886274
UniProt:
D7L2V7
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MDDELEGLRAHFPVSFGKTSKVSASTEAIHSATRRTDVATDAGVSSDFTTKKPDSSKSES
GFPSLSSSSETWLRSVRGPKRNPNSSSLAPSDDDIAMGPPPSKPTQEEDEEDDGVMMGPP
PPPKGLGNSNDSDDDEDMIGPPPPPRAAIDSDEDSDDDDANDNEENRYQIPLSNEIQLKG
HIKIVSSLAVDNAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQVRSLSWSPT
SGHFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPRTKETVL
TSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDREGKRIAGGVGDGSIQIWS
LKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGL
PNYYPQTNVSFSPDEQIILTGTSVEKDSTTGGLLCFYDRTKLEIVQKVGISPTSSVVQCA
WHPRLNQIFATSGDKSQGGTHILYDPTQSERGACVCVARAPRKKSVDDYQPEPVIHNPHA
LPLFRDAPSRKRQREKALKDPIKAHKPEIPMTGPGHGGRVGTTGSSLLTQYLLKQGGMIK
ETWMEEDPREAILKYAEVAVKDPKFIAPAYSQTQPETIFAKSDDEEEEGDTKK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaattggaaggtcttcgagctcattttcctgtttcgttcggtaagacatcg
aaggtttcggcgtcaactgaagccattcacagcgcaactcgccgcaccgatgtagccacc
gacgccggagtttcgtcggatttcaccacgaaaaaacctgactctagtaaatctgaatct
ggattcccgtctctgtcttcctcatctgaaacctggctccgaagtgttcgcggtccgaaa
cgtaaccctaatagctccagtctagctccttccgatgatgatatagcaatgggtccgccg
ccatctaaaccgacgcaagaggaagatgaggaggatgacggagttatgatgggaccaccg
ccgccaccgaagggacttgggaatagtaatgattctgatgatgatgaggatatgatcggt
cctccgccgccgcctcgggctgctatagattccgatgaagattcagatgatgatgatgct
aatgacaacgaggagaatcgttaccaaattccattgagcaacgagattcagctcaagggc
catataaagattgtttcatctctcgctgttgataatgctggagctagagttctttctgga
agctatgactacactgtgcgtatgtatgattttcaagggatgaattcaagacttcagtct
tttagacagatcgaaccatctgagggacaccaagttcgcagcttgagctggagtcccact
tctggtcattttctatgcgttactggctctgcacaagctaagatttttgatcgagatggg
cttactcttggtgagtttatgaaaggagatatgtatattcgtgatctgaagaacactaag
ggccatatttgtgggttgacttgtggagaatggcatccgaggactaaggaaacggttctg
acttcttcggaagacgggtctttgcgtatttgggatgttaataacttcctaagccaaacg
caggttattaagccgaagcttgctagaccagggagggttccagttacaacctgtgcttgg
gaccgtgagggaaagcgtatcgccggtggcgtaggagatggttctatacagatttggagt
ctcaagccaggatggggaagccgaccagatatatacgttgggaaggcccacactgatgat
ataacctctgtaaagttttctagcgatggcagaattctgttgtcgaggagttttgatggt
tctctgaaggtctgggacttgcggcagatgaaagaagctctaaaagttttcgagggtctc
cctaattattatccacaaaccaacgtttcctttagtccagacgaacaaatcatcctgact
ggaacatccgtcgagaaagacagcacaacaggaggcttgctatgcttctacgatcgcacc
aaactagagattgttcaaaaagtcggaatctctccaacttccagcgtggtgcaatgcgct
tggcacccgaggttgaatcagatatttgcaacatccggagacaaaagccaaggagggact
cacattctttacgacccaactcagagcgagagaggcgcatgcgtctgtgttgcacgtgca
ccaaggaagaaatctgtagacgattaccaaccagaaccagtaatacacaatcctcatgca
ctaccgttgttcagagacgcaccaagccgtaaaagacaaagagagaaagcattgaaggat
cctattaaagcccacaagcctgagatacccatgacaggtcctggtcatggtggaagagtt
gggactactggtagtagcttattaacacaatatcttctcaagcaaggtgggatgataaaa
gagacgtggatggaggaagatccaagagaagcgatattgaaatacgcagaggttgctgtt
aaagatcctaagtttattgcacctgcttactctcagacccagcctgagaccatcttcgct
aaatctgatgacgaagaagaagaaggtgacaccaaaaaataa
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