Arabidopsis lyrata (lyrate rockcress): 9323004
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Entry
9323004 CDS
T01578
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9323004
Spliceosome [BR:
aly03041
]
Complex A
Other components
Complex A specific factors
9323004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
RRM_1
KH_1
zf-CCHC
eIF3g
RRM_5
PHD_4
RapA_C
zf-CCHC_2
DUF2508
Motif
Other DBs
NCBI-GeneID:
9323004
NCBI-ProteinID:
XP_020889657
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MESVELNNPNPNSQTLHQPPPSSNGDTAPLASDHMNPQNSDSVALNGSSTPTPDTNGSSA
KPEFLRPLLSENDKDQSGGEEETTSRRKRRSRWDPPPSEGGTDSEPGIRKRKSRWADDEP
KPQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYD
NMGIRINTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGY
NFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRHQQKKDLKYDPAENEDLHVLVEA
ETQDALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYA
CPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQS
ATLALGPGSNPPWANNAGNGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPMLEDDGLIN
LFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGK
LPPPTAPPGPPAPTQGYPPSNQPPGAYPSQQYATGGQLPNPPVGYSTAPVPWGPPVPSYS
PYAPPPPPPGSYHPVHGQHMSPYGMQYPPPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQ
ADSGAATSVPPNVYGSSVTAMPGQPPYMSYTSYYNAVPPPPPPAPASSTDHSQNMGNMPW
ANNPPVSTPEHSQGLGNASWAPNPPMPPTVGYSQSMGNVPWAPKPPVQPPAENPSTVGDS
EYEKFMAEMK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgtcgaattgaacaatcccaaccccaattcgcaaaccctacatcaacctcct
ccttcctccaacggagacactgctccactcgcatcggatcatatgaatcctcagaattcg
gattctgtggctttaaacggttcgtctactcctacacccgatactaatggttcatcagca
aagcctgagttcttgcgtcctttgctatcggagaacgataaggatcagtctggtggagag
gaagaaactacgagcaggaggaagcgtcggagccggtgggatcctccgccttctgaaggg
ggtactgattccgaacctggaattaggaagcgtaagtcgcgatgggcagatgatgagccc
aagccgcagattcagttacctgatttcatgaaggatttcaccggaggtattgagttcgat
cctgagattcaggctttgaatagtaggttacttgagattagtaggatgttgcagtctggt
atgcctttggatgatagaccggaaggacagaggtctccttcaccagagcctgtgtatgat
aatatgggaattaggattaacactagagagtatagagcaagggagagattgaatagagaa
agacaagaaatcattgctcagattatcaaaaagaatccggcttttaaacctccagcagat
tataggcctcctaagctccacaagaagcttttcattccaatgaaggagtttcctggttac
aattttattggtctcattattggccccagaggtaatactcagaagagaatggagagggag
acgggtgctaaaattgttattcggggtaaaggatctgtaaaagaaggtaggcatcagcag
aaaaaggatttgaaatatgaccctgctgagaatgaagacttgcatgttttagttgaggct
gagactcaggatgctcttgaagctgctgctggtatggttgagaagcttttgcaacctgtt
gatgaagtgttgaacgagcacaagaggcaacagctcagggaacttgctaccttgaatgga
acaataagggatgaagaattctgtagactgtgtggtgagccaggacatagacagtatgca
tgtccttctcgtaccaatacctttaagagtgatgttctttgcaagatttgtggtgatggt
ggacaccctactattgattgcccggtgaagggtactactgggaagaaaatggatgatgaa
tatcagaacttcttagcagagttgggaggaactgtacctgaatcttctctcaaacagagt
gctaccctggctcttggtccgggaagtaatcctccatgggctaataatgcagggaatggt
gcaagtgcgcatcctggcttagggtcaactccgaccaaacccccctccaaagaatatgac
gaaacaaatctgtacattgggttcttacctccgatgcttgaggacgatggtttgattaat
cttttttcatccttcggtgaaattgtgatggcaaaggtaatcaaggaccgtgtgactggg
ctgagcaaaggctatggttttgtgaagtacgctgatgtgcagatggctaatactgctgtt
caggcaatgaatggctatcggttcgaaggccgaacactcgctgtcaggattgcaggcaaa
ttgccaccgcctactgcacctccaggacctccagcaccaactcaaggttatcctccctca
aaccagcctcctggtgcctatccttctcaacagtatgcaactggtggtcaactgccaaat
cctcctgtaggttattcgacagctccagttccttggggtcctcctgttccctcctattct
ccatatgctcctccccctccacctcctggttcttaccatcctgtccatggtcaacatatg
tctccttatggaatgcaatacccaccaccaccacctcatgtgacacaagcacctccacct
ggcactactcaaaacccatcttctagtgaaccccagcaaagcttcccaccaggagtacaa
gctgacagtggtgctgctacgtctgtaccaccaaatgtctatggtagctcagtcacggct
atgcctggacagcctccatatatgagttatacgtcttactacaatgctgttccccctcca
ccacctccagcaccggcctcgtctactgatcattcccaaaacatgggtaacatgccatgg
gccaacaatcctcctgtctcaacacctgagcactcacaaggtcttggtaatgcatcttgg
gcacctaatcctcctatgccgcccactgttggttattcacagagcatggggaacgtaccc
tgggctcccaaacctccagtacagccccctgcagagaatccatccactgttggagattct
gagtatgagaagttcatggctgagatgaagtag
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integrated database retrieval system
