Arabidopsis lyrata (lyrate rockcress): 9324608
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Entry
9324608 CDS
T01578
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
9324608
NCBI-ProteinID:
XP_020890807
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MATDSSGVTISGNFSNGENAETLNLDTTELYSSAISSVSTQSPPPKPPFSSLSIPQSKRI
PKTNFIVDLFRFPQHSSTSVAFFLSHFHSDHYSGLSSTWSKGIIFCSHKTARLVEEILQV
PSQFVFALPMNQMVMIDGSEVVLIEANHCPGAVQFLFKVKLENGGFERYVHTGDFRFCDE
MRFDSFLSGFIGCDGVFLDTTYCNPKFVFPTQEESVGYVVSVIDKIDGECVETKKKVLFL
VATYVIGKEKILVEIARRCKRKIVVDLRKMSILGILGCGESGMFTEDVNESDVHVVGWNV
LGETWPYFRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDSMEIHLVPYS
EHSNYDELREYIKFLKPKRVIPTVGVDIEKLDSKEVNKMQKHFSGLVDEMANKKDFLLGF
YCQSYQKNEKNDVDVVSGLAEVYAGDDKNACEDGGDNVPSSRGPLLHDTAPSSDSSVTER
LLVELRDSLPAWVTEEQMLNLIKKHAGNPVEIVSNFYECEAELYKQSSLPTLSLENQPVL
FDDDVTDLQPNPVKSTCPDVQAVQEGFDLPKKMNLTKGTISPGKRGKSSGSKSNKKAKKD
PKSRPVSPRQPTIFKFFNKVLDSGSNSVGVGSETEECNTDKKMVHNDATEAYKEVTDQFI
DIVNGSESLRDYAASIIDEAKGDINRALNIYYSNPIPGEGGLSSKSIQFSHCPEACSSQE
GKKASEKSGHAVNICVQSSAEEIVDKNYVSLPPEQYKPKEHACWRDGQPAPYIHLVRTFA
SVESEKGKIKAMSMLCNMFRSLLALSPEDVLPAVYLCTNKISADHENIDLNIGGSLISSA
LEEACGISRPTVRDMYNSTGDLGDVAQLCRQTQKLLVPPPPLLIRDVFSTLRKISVQSGT
GSTRQKKNLIVKLMRSCREKEIKFLVRTLVRNLRIGAMLRTVLPALGRAIVMNSFWSCHN
KELSENCFREKLEGVSAAVVEAYNILPSLDVVVPSLMDKDIEFSTSTLSMVPGIPIKPML
AKIAKGVEEFFELFQDKAFTCEYKYDGQRAQIHKLLDGTVRIFSRNGDETTARFPDLVDV
IKQFSCPVAETFMLDAEVVAIDRKNGSKFMSFQELSTRERGSKDALVTTESIKVEVCVFV
FDIMFGNGEQLLALPLRERRRRLKEVFPEIRPGYLEYAKEITVEAEEASLNNQDTLSRIN
AFLGEAFQSSCEGIMVKSLDIDAGYFPTKRYDSWLKVKRDYVDGLGDTLDLVPIGAWHGN
GRKAGWYSPLLMACFNPETEEFQSVCRVMSGFSDAFYIEMKELYSGDKILTKKPPYYRTG
ETPDMWFSTEVVWEIRGADFTVSPVHSAALGLVHPSRGISVRFPRFIRKVTDRNPEECST
AADIAEMFHAQTRKLNITSQH
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgattccagcggagtcacaatctccggcaatttctcaaatggcgagaacgca
gaaaccctaaacctcgacactacagaactctactcatcagcaatatcctccgtctctaca
caatctcccccaccgaaaccaccgttctcatctctttcaatccctcaatcaaaacgaatc
cctaaaactaacttcatcgtcgatctcttccgcttcccacaacattcctccacctccgtc
gctttcttcctctcacatttccattccgatcactattccggtctctcctctacttggtct
aaaggaattatcttctgctcacacaaaaccgctcgtctcgtcgaagaaatccttcaagtt
ccttcacaattcgtcttcgctttacctatgaaccaaatggttatgatcgatggctctgaa
gttgtgttgattgaagcaaatcactgtccaggagcggtacagtttttgtttaaagtcaaa
ttagagaacggtggatttgagaggtatgttcatactggagatttcagattctgtgatgag
atgagatttgattcgtttcttagtggttttattggatgtgatggtgtttttctggatact
acttattgtaatcctaagtttgtttttccgacgcaagaggaatctgttggttatgttgtt
agtgtgatagataagattgatggtgagtgtgtggagacgaagaagaaggttttgtttctt
gttgctacttatgttattggtaaagagaagattttggttgagattgctaggagatgtaag
aggaaaattgttgtggatctcaggaagatgtcgattttggggattttggggtgtggggag
agtggaatgtttacggaggatgtgaatgagagtgatgttcatgttgtggggtggaatgtg
ttgggagagacttggccgtattttcggccgaattttgtgaagatgaatgagattatggtc
gagaaagggtatgataaggttgtaggttttgtgcctacagggtggacttatgaagtgaag
cggaataagtttgcggttaggtttaaagattcgatggagattcatcttgtaccgtatagt
gagcattcaaactatgatgagcttagagagtacataaagttcttgaaacctaaaagagtt
attcctacagttggagttgatatcgagaagcttgatagcaaggaggttaataagatgcag
aaacatttttctggattggtagatgaaatggcaaacaagaaagattttttattgggtttc
tattgccagtcttaccagaagaatgagaaaaatgacgtagatgttgtgtcaggcttggct
gaggtctacgcaggggacgataaaaatgcatgtgaagacggtggagataatgttccatca
tctagaggacccttattgcatgatacagctccaagtagtgattcttcggtgaccgaaaga
ttgcttgtagaactacgtgattctttgcctgcttgggtcactgaagagcagatgttaaat
ctgattaagaagcatgctggtaatcccgtggaaatagttagtaacttttatgaatgtgaa
gcagagctttacaagcaatcctctcttcccacgctttccttggaaaatcagcctgttttg
tttgatgacgatgtaacagacttgcaaccaaatcctgtgaagagcacttgtccagatgtt
caagcagttcaagaaggttttgacttaccaaaaaaaatgaatttaacaaagggtactatt
tctcctgggaaaagaggcaaaagctcgggcagtaaatcaaacaagaaggccaagaaagat
ccaaaatcaagaccagttagtccaaggcagccaaccatttttaagttcttcaataaggtc
ttggatagtggatctaattctgttggtgttggatcagagactgaagagtgtaatacagat
aaaaagatggtccacaatgatgctacagaagcatacaaagaagtgacagatcaatttatt
gatattgttaatggctctgaatctctaagagattatgctgcttccatcattgatgaggct
aaaggagatataaatagggcactgaacatctattacagtaaccccatacctggtgaggga
ggactctccagcaaatcaattcagttttcgcattgtccagaagcgtgctcctctcaggag
gggaaaaaggcgtcagaaaagtcaggacatgcagtcaacatatgtgtgcagtcatcagca
gaggaaattgtggacaaaaattatgtatctctacctcctgaacaatataaacctaaagag
cacgcctgttggagggatggacagcctgctccatatatccacctagtccgaacatttgct
tctgttgaaagtgaaaagggaaagatcaaagctatgtctatgctttgcaacatgtttaga
agcttgttggctctctctccagaagatgttctgcccgctgtttatctttgcacaaataag
atttcggctgaccatgagaatattgatcttaacattggtggaagtctaatctcttctgca
ttggaagaagcatgtggaataagtcggcctactgtgagggatatgtataatagcaccgga
gatcttggagatgttgcgcagctatgtcgacaaacgcaaaagctactggttcctccacct
ccacttctaatcagagatgtgttttcaactctacgaaagataagtgtgcagtcaggtact
ggaagtactaggcaaaagaaaaaccttatcgtgaagctaatgcgctcttgtagagagaaa
gagatcaaatttcttgtaagaacattggtccgtaatttaaggattggcgctatgttgaga
actgttcttcctgcacttgggcgagcaatcgttatgaattctttttggagttgccataac
aaagaactgtcagaaaactgtttcagggagaaacttgagggagtttctgctgcagtagtt
gaggcttacaatatacttccttctctggacgtggttgttccttctctcatggacaaagac
attgagttttcaacgtcaactctatcaatggttccagggatacctataaaacccatgctt
gctaaaattgctaagggcgtcgaagaattttttgagctcttccaagacaaggcgtttact
tgtgaatacaaatatgatggtcagcgtgcccagatccataagttacttgatggtactgtg
cgtatcttctctcggaatggggacgaaacaacagcgagatttccggatcttgttgatgtc
ataaaacagttttcttgccctgtagcggagacattcatgttggacgcagaggtggttgca
attgatagaaaaaatggaagcaaattcatgtcattccaagagttatcaacaagagagaga
gggagcaaagatgctttggtaactaccgaaagtattaaggttgaagtctgcgtctttgtg
tttgatattatgttcggcaatggagaacagctgttggctcttcctctccgtgagagaaga
agacgtctaaaggaggtcttccctgagattaggccaggttatcttgaatatgctaaggaa
attacagtggaagcagaagaagcttctttgaataatcaggacactttgagtagaataaat
gcttttttgggagaggcatttcagtcatcttgcgaaggaatcatggttaagtctttagat
attgatgcaggatacttccccacaaagcgttatgattcatggctcaaggttaagcgagat
tatgtagatggattgggcgacacattagatttagttcctataggtgcttggcatggcaac
gggagaaaagcgggatggtatagtccactccttatggcctgcttcaaccctgagactgag
gaattccagagtgtctgccgtgtcatgtctgggttttctgatgccttttacatcgagatg
aaagaactctactcaggggataagatccttacgaaaaagccgccttactacagaacaggg
gaaacacctgacatgtggttttccacagaggttgtttgggaaatcagaggtgcagatttc
acggtctcgcctgttcacagtgccgctttaggtctcgtccatccatcccgaggtatctcc
gttaggtttccgagatttattcgtaaagtaacagacagaaatccggaggaatgcagcacg
gctgcagatatcgcagagatgtttcatgctcaaaccagaaaattgaacatcacctctcaa
cattaa
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