Arabidopsis lyrata (lyrate rockcress): 9325161
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Entry
9325161 CDS
T01578
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X2
KO
K03243
translation initiation factor 5B
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
aly03012
]
9325161
Translation factors [BR:
aly03012
]
Eukaryotic type
Initiation factors
eIF-5
9325161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
9325161
NCBI-ProteinID:
XP_002889098
UniProt:
D7KTW4
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MLICRKYSEPMGRRKPSSSRGGDDEQPPLVGAKSNKKAVQIDDDDDGEYSIKTEEPRVEE
EKVVITGKKKSIKKGTQQQEEDDDFAEVVPENAFVGKKKSKGKNGGGSVSFALLADKEEE
DDNESNGDKDDEPVISFTGKKHASNKGKKGFAVSAFDALGGDKDEEKVDGDEEQVYPIIF
SGKKKKSSKSSKKTTNKVALLDEEEGTDASTSRLGKNTMGDEESLEITFSGKKKGSSVLA
SVGDDSVAYETSQAKTPDTKSVEVIETGKSKKKKKKNKSGRTAEEEYDFDNVLEEFGETP
AAGRPASSTPGEEKVQAQPGPVAPVENADEKEGEEETVKTAAAKKKKKKKEKEKEKKAAA
AAATSSVEAKEGKQEESVTEPLQEKKKDAKGKAAEKKIPKHVKEMQEALARRQEAEERKK
KEEEEKLRKEEEERRRQEELEAQAEEAKRKRKEKEKEKLLRKKQEGKLLTAKQKSEALKR
EAFKNQLLAAGGGLPVADNDGDATSSKRPIYANKKKSAHQKGIDTYVQREDEVEPKENKA
DEPDTLGEVGLTDTGKVDLIESANTDEKSEPADVAQENGIEEDDEWDAKSWDTVDLNLKG
EFDDEEEEPQPVVKKELKDAVSKAHDSGMSKPRTAVVKAMSEVEHATPTKRAKKGKGLAP
SEFIEEGGENLRSIICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENI
RERTRELKADAKIKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIMHELEPQTIES
LSLLRMRNTEFIVALNKVDLLYGWKTCKNAPIVKAMKQQSKDVTNEFNLRLTRIITQFKE
QGLNTELYYKNKEMGETFSIVPTSAKSGEGIPDLLLLLVQWAQKTMFEKLTYVDKVKCTV
LEVKVIEGHGTTIDVVLVNGELHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYL
HHKEIKAAQGIKITAQGLEHAIAGTSLHVVGPDDDIEAIKESAMEDMESVLSRIDNSGEG
VYVQASTLGSLEALLEFLKSPAVNIPVSGIGIGPVHKKDIMKAGVMLEKKKEYATILAFD
VKVTTEARELADEMGVKIFCADIIYRLFDQFKAYIENIKEEKMKESAGEAVFPCVLQILP
NCVFNKRDPIILGVKVHDGILKIGTPICVPGREFIDIGRIASIENNHKPVDYAEKGEEVA
IKIVASNREEQKMFGRHFDMEDELVSHISRRSIDILKADYMKEMSTEKWKLLVKLKRIFK
IP
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttgtaggaagtattcggaaccaatgggtcggaggaagccgagtagttctcga
ggtggagatgatgagcaaccacctctcgttggtgctaaatctaataagaaagctgttcaa
attgatgatgatgatgatggtgagtactccataaaaactgaggagcctagagttgaggaa
gagaaagttgttatcactgggaagaagaagagtattaagaagggtacgcagcagcaggag
gaggacgatgattttgctgaggttgttcccgagaatgcttttgtagggaagaagaaatcg
aaaggtaagaacggaggtggctctgttagctttgccctgcttgctgataaggaggaagag
gatgataatgaatctaatggtgacaaagatgatgagccagttataagttttacgggtaag
aagcatgcatctaacaagggtaaaaaaggctttgcggtttcagcttttgatgcccttggt
ggtgataaggatgaagagaaagtggatggtgatgaggaacaagtgtatcctatcatcttc
tctggtaagaaaaagaagtcctccaaatcttctaagaagaccactaataaagttgctttg
cttgatgaggaagaagggacagatgcttcgacctctagacttggcaaaaatacaatggga
gatgaagagagcctcgaaatcacgttttctggtaaaaagaagggcagcagtgttttggcc
tcagtaggtgatgactcagttgcctacgaaactagtcaagctaaaactcctgatactaag
agtgtggaggttatagaaactggaaagagtaagaaaaagaagaagaagaataagagtgga
aggacagcagaggaagagtatgattttgacaatgttcttgaagaatttggagaaacccct
gctgctggaagacctgcttcatcgacgcctggagaggagaaggttcaagctcagcctggg
ccagttgcacctgtagagaatgctgatgagaaggaaggagaagaagagactgttaagact
gctgcagcgaagaaaaagaaaaagaagaaggagaaagagaaggaaaaaaaagcagcagct
gctgcagcaacctcttctgtagaggctaaggagggaaaacaagaagaatcagtaactgag
ccactacaggagaagaagaaggatgcaaagggtaaagcagcagagaagaaaatccctaaa
catgttaaagagatgcaagaggctcttgcacggcggcaagaagccgaagagagaaaaaag
aaggaagaagaagaaaaattgaggaaggaggaagaggagcgccgcaggcaggaagagctt
gaggctcaagctgaggaggctaagcgtaagagaaaggaaaaagaaaaggagaaactgttg
aggaagaagcaagagggcaagcttctaacagcaaagcaaaagagtgaagctctaaagagg
gaggcttttaagaaccagctgctggctgctggtggaggtcttcctgttgcagataatgat
ggtgatgctacttcctcaaagcgtcccatttatgccaacaagaaaaaatctgctcaccag
aaaggcattgacacttatgttcagagggaagatgaggtagagccaaaagagaataaagca
gatgaaccagatactttaggtgaagtgggtttaacagacactggaaaggttgatttaatt
gagtcagcaaacacagacgagaaatcagaacctgctgatgttgctcaggagaatgggatt
gaggaagatgatgaatgggatgcaaaaagctgggatactgttgatcttaacctcaaaggt
gaatttgatgacgaagaggaagaacctcagcctgtggttaagaaagaattaaaagatgct
gtatcaaaggcacatgattcaggtatgagcaagccaagaacagctgtcgtaaaagctatg
tctgaagtggaacatgctacgccgacaaaacgtgctaagaagggtaaaggcttagctcca
agtgaatttatagaagaaggtggagaaaatctccgttctattatttgctgtatcatgggt
catgttgatactggtaaaacaaagctgttggattgcatcagaggaacaaatgtacaggaa
ggtgaggctggaggtattactcagcagattggtgcaacatatttccctgcggaaaacatc
cgagagaggaccagggaactgaaagccgatgcaaaaattaaggtgccaggtctattagtt
atcgatacacctggccatgagtccttcacgaatctgcgttcaagaggttcaagtttgtgt
gaccttgcaattttggtggttgacataatgcatgagttagagccacaaaccatagaatct
ctaagtcttttgagaatgaggaatacagagttcattgttgcattgaataaggtggattta
ctctatggatggaaaacatgcaagaatgctcctatcgtgaaggcaatgaagcagcaatct
aaagatgttacaaatgaatttaacttgaggctgacccggattattacccaattcaaggag
caaggacttaacaccgagctttactacaagaataaagaaatgggcgaaactttcagtatt
gttcctactagtgctaaaagcggggaagggatcccagatctcttgctgttgttggttcaa
tgggctcagaaaacaatgtttgagaagcttacttatgttgacaaagtgaagtgtactgtc
cttgaggtcaaagttattgaaggccatggtacaacgattgatgttgtgttggtaaacggt
gaactccatgaaggtgatcaaatcgtcgtttgtgggttacagggacctattgtcacaacg
attagagcattactgactcctcatccaatgaaggagttaagagtgaagggtacttatctg
catcacaaagaaataaaggctgcacagggcatcaaaattaccgcccagggccttgaacac
gcaattgctggtacttccctgcatgtggttggacctgatgatgacatcgaggcaattaag
gagtcggctatggaagatatggaatcagttttgagcaggattgacaatagtggtgaagga
gtttatgtacaagcgtctacattagggtcattagaagcattgcttgaattcttgaagtcc
ccagctgtaaatatacctgtcagtggtattggcatagggcctgtgcataagaaggatata
atgaaggctggagtgatgctcgagaagaaaaaggaatatgctacaattttggcatttgat
gtgaaagtgactacagaggctcgtgaacttgcagacgaaatgggagtaaaaatcttttgc
gctgatatcatctatcgtttattcgatcagtttaaggcttacattgagaatatcaaagag
gagaaaatgaaggaatcagccggtgaggcagtcttcccatgtgtccttcagattttacct
aactgtgtgttcaataagagagacccaataatccttggagttaaggtccacgacggtata
cttaagattggaacccccatttgcgtcccgggcagagagttcatcgatattggtcgcatt
gcctctattgagaacaaccacaagcctgttgactacgcagagaagggcgaggaggtggcg
attaagattgttgcttcaaatcgtgaagaacagaagatgtttggaaggcattttgacatg
gaagatgagcttgtgagtcacatttcgaggagatctatcgacatactcaaagctgactac
atgaaagaaatgtcgacagagaaatggaagctccttgtgaaactgaagagaatcttcaag
attccctga
DBGET
integrated database retrieval system
