Arabidopsis lyrata (lyrate rockcress): 9325883
Help
Entry
9325883 CDS
T01578
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9325883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9325883
Spliceosome [BR:
aly03041
]
Complex C
Other components
Step II factors
9325883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
9325883
NCBI-ProteinID:
XP_002892579
UniProt:
D7KLF5
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MDLIQSYDEEEAVAFSPESSPPRMLKAKSSAPEVDDTALALTVANVNRSKSKPIDPTQHV
VLFNPTHEQMWAPIYGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFDEQYNTFHKYGY
AADPSGMNYVGDVAALKQNDGLSVYNIPQSEQKRRKIEKNKEEREGEEKKEEIEPEAENP
ATEAWLMKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGEAKGEHYADKSTF
HGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSA
GMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVI
STFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEITQEYDQHLGAVNTITFV
DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILI
YSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK
CHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatctgattcaatcctacgacgaagaagaagccgttgctttctcgccggaatcttca
ccgcctcgtatgttaaaggcgaaatcatcggcgccggaggtagacgatacggcgttagct
ctcacggtggctaacgtgaatcgatcaaaatcgaagccgattgacccgactcaacacgtc
gtcttgtttaacccaacccatgagcagatgtgggctccgatttacggccccgcgcatccg
tatgccaaagacgggatcgctcaagggatgcggaatcacaagctagggtctgtggaagat
gcttcgattggatcatttgggttcgatgagcagtacaatacgtttcataagtacggttat
gcggcggatccgtctgggatgaattacgtcggcgatgttgcggcgttgaagcagaacgat
ggtctttcggtttataatatccctcagagtgagcagaagcggaggaagattgagaagaat
aaagaggagagggaaggagaagagaaaaaggaagagattgagccggaagctgagaatccg
gcgacggaagcttggcttatgaagaataggaagagtccatggtcgaggaagaaggaggtg
gttcagggagagttgacggaggagcagaagaagtatgcggaggatcacgcgaagaagaag
gaagagaagggacaacaaggtgaagccaaaggggagcattatgcggataagagtacattc
catggcaaagaggagaaagattatcaaggaaggtcttggattgaggctccgaaagatgca
aaagcgaacaatgatcattgttacattccaaaacgtttggttcatacatggagtggtcac
acgaaaggtgtttctgctattaggttcttcccaaagcaaggacatttgcttctctctgca
ggtatggattgtaaggttaagatttgggatgtgtataactctggtaaatgtatgaggact
tacatgggacacgccaaagctgtgagggatatttgcttctccaatgatgggtctaaattc
ttaactgctgggtatgataagaacattaagtattgggacacagaaactggccaagttata
tcgactttctcgactgggaagattccgtatgtagttaagctgaatccggatgatgacaag
cagaacattttgttggctggtatgagtgataagaagattgtgcagtgggatattaatacg
ggggagattactcaagagtatgatcagcacttgggagcagttaatactatcacatttgtt
gacaataacagaagatttgtcacatcgagtgatgataagtctctccgtgtttgggaattt
gggatcccggtggttatcaagtatatcagtgagcctcatatgcattctatgccttccatt
tctgttcacccgaatggaaactggcttgctgcacagagtttggataaccagattctgata
tacagtacccgagaaaggtttcagctgaataaaaagaagaggtttgcagggcacattgtt
gccggttatgcatgccaagtgaacttctcaccagatggacggtttgtaatgtcaggagat
ggtgagggtaagtgctggttttgggactggaagagctgcaaagtgtttagaactctgaaa
tgtcacaatggagtatgcattggagccgagtggcatcctctggaacagagtaaagtcgca
acatgtggatgggacggcttgattaagtactgggactaa
DBGET
integrated database retrieval system