KEGG   Arabidopsis lyrata (lyrate rockcress): 9327153
Entry
9327153           CDS       T01578                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9327153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9327153
Spliceosome [BR:aly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    9327153
 Complex B
    9327153
 Complex C
   U2 SnRNP specific factors
    9327153
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 9327153
NCBI-ProteinID: XP_002893817
UniProt: D7KK48
LinkDB
Position
Unknown
AA seq 778 aa
MLSSMQILPLEAPPTDGKLGPLPPSQLTDQEVEEMELQAEQNNSNQAPAAVATHTRTIGI
IHPPPDIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYR
AQGTDDSDGTDLQLDTAAADESEAGDAQPDLQAQFRIPPKPLEPPEPEKYTVRLPEGITG
EELDIIKLTAQFVARNGKSFLTGLTSREINNPQFQFMKPTHSMFTFFTSLVDAYSEVLMP
PKDLKEKLRKSVADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWHDFVV
VESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLVAEGM
RAANLEENVKIENVHDEEAPMRIVKNWKRPEDRIPTERDPTKVVVSPITGELIPINEMSE
HMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEEEVSNAVK
AEIEKKKDEQPKQVIWDGHIGSIGRTANQALTQNANGEEQGDGVYGDPNSFPGPAALPPP
RPGVPIVRPLPPPPNLALNLPRPPPSAQYPGAPRPLGVPMMQPMHQQHQFSMPGPPGQPQ
MMMNRPPQMMAQPGMHVPPPPGSQFAPMQIPRPYGQLPPSAMGMMQPPHMPGMAPPPPPE
EAPPPLPEEPEPKRQKFDESALVPEDQFLAQHPGPATIRVSMPNVDDGQVIEITVQSLSE
NVGSLKEKIAGEIQIPANKQKISGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgttgagctcgatgcagatactgccactggaggctcctcctaccgacgggaagttaggt
ccacttcctccgtcgcaattaactgatcaggaagtcgaagagatggagttgcaagcagag
caaaacaattcaaatcaagctccggcggctgttgcgactcacacaaggactattggaatt
attcatccacctccagatatcagaactattgttgagaaaacggctcagtttgtttccaaa
aacgggttggagtttgaaaagaggattattgttagtaatgaaaagaatgccaagttcaac
tttttgaagagctcagatccttatcatgccttttaccagcacaagctcactgaataccgt
gctcagggtactgatgattcagatggtacagatcttcaacttgatactgctgctgctgat
gagtctgaggcaggtgatgcacaacccgatcttcaggctcagtttaggattcctcctaag
cctcttgaacctccggagcctgagaagtatacagttagacttcctgaagggatcacgggc
gaggagcttgatattattaagcttacagcacagtttgtggcacggaatgggaaatcgttt
ttaacgggattgaccagtagagaaatcaacaatcctcagtttcagtttatgaagccaaca
catagcatgttcactttttttacttctctggttgatgcctattcagaagttttaatgcct
cccaaagatttgaaagaaaagctgagaaagagtgttgctgatttgactactgttcttgag
cgttgtttgcatcgtcttgaatgggatcgttctcaggagcagcagaagaagaaagaagag
gatgagaaagagctggagcgagtgcagatggctatgattgattggcatgattttgtggtg
gttgagtcgatagattttgcggacgaggaagatgaagagttaccaccgcctatgacactt
gacgaggttatacggaggagcaaagcatcagcgatggaagaagatgaaattgttgagcct
ggaaaggaggtcgaaatggaaatggacgaagaagaagttaagcttgttgcagaaggaatg
agagcagcaaacctagaagagaatgttaagattgaaaatgtacatgatgaagaagcacct
atgagaattgttaagaactggaagaggccagaagacaggatcccaacagagagagatcca
actaaagttgttgtatcaccaattactggcgagctgattcccatcaacgagatgtctgag
cacatgaggatttctcttattgatcctaagttcaaagaacagaaggatcggatgtttgct
aagattcgtgaaaccactcttgcacaagatgatgagattgctaaaaacatagtcgggttg
gcccgcctgcgtccggatatctttggaacaacagaagaagaagtctcaaatgctgtaaaa
gcagagattgagaagaagaaagatgagcagcccaagcaagtgatatgggatggtcacata
ggaagtattggtcgcacagcaaaccaagccttgactcagaacgctaatggagaggagcaa
ggtgatggcgtttacggagatcccaatagcttccctggtccagctgctcttcctcctcct
cgaccaggtgtcccaatagtccgaccattgccaccccctcctaatctcgccctgaacctc
cctcgtcctcccccttctgctcagtaccccggtgcaccaaggccattaggtgttccgatg
atgcaacctatgcatcaacaacaccagttctcgatgccggggccaccaggacagccgcag
atgatgatgaaccgaccaccacagatgatggcacagcctggtatgcatgtgccacctcca
ccgggatctcagtttgctcctatgcaaattcctagaccttatggtcagcttccaccgtct
gcaatggggatgatgcaaccaccacatatgcctgggatggctcctcctccaccacctgag
gaggcaccacctcctcttcctgaggaaccagagccaaagagacaaaagttcgacgagtca
gcccttgttccagaagaccagtttcttgctcagcatccgggtccggctacaatcagggtt
tctatgccaaacgtggatgatgggcaagtcattgagatcacagtgcagtcattatccgaa
aacgtgggaagtttgaaggagaaaatagctggggagatacaaattccagcaaacaaacag
aagataagtggaaaagctgggttcttaaaggacaacatgtcgcttgcgcattacaatgtc
ggagcaggagaaatcctaacattgtctttgagagaacgtggtgggagaaagagatag

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