Arabidopsis lyrata (lyrate rockcress): 9327749
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Entry
9327749 CDS
T01578
Name
(RefSeq) DNA ligase 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF632
DUF630
SopA
Sec8_N
Motif
Other DBs
NCBI-GeneID:
9327749
NCBI-ProteinID:
XP_020868204
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MGCAQSKIENEEAVTRCKERKQLMKDAVTARNAFAAAHSAYAMALKNTGAALSDYSHGEF
LVSNHSSSSSAAAIASTSSLPTAISPPLPSSIAAISNSTASSSAAVPQPIPDTLPPPPPP
PPPLPLQRAATMPEMNGRSGGGPSGNGLNGIEEDGTLDNDDDDDDDSELENRDRLVRKSR
SRGGRTTIEDHHHQEEKAPPPPPAVNSRPIQPPRQHQHQHQQQQQQPFYDYFFPNVENMP
GTTLEDTPPQPQPQPQPTRPVPPQPHSPVVTEGEEDEEEEEEDEEDEEEEEEEEAVLERK
PPVEERPKRVEEVSVELEKVTNLRGMKKSKGIGIPGERRGVRITTDLANVFNELDDSFLK
ASESAHEVSKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGIPNADDGKDDVD
LEENETHATVLDKLLAWEKKLYDEVKAGELMKIEYQKKVAHLNRVKKRGGHSDSLERAKA
AVSHLHTRYIVDMQSMDSTVSEINRLRDEQLYLKLILLVEAMGKMWEMMQMHHQRQAEIS
KVLKSLDVSQAVKETNDHHHERTIQLLAVVQEWHTQFCRMIDHQKEYIKALGGWLKLNLI
PIESTLKEKVSSPPRVPNPAIQKLLHAWYDRIDKIPDEMARTAIINFAAVVSTIMQQQED
EINLRNKCEETKKELGRKIRQFEEWYYKYMQKRGPEGMNPEGSEADNDHKDEVMVRQFNV
EQIKKRLEEEEEAYHRQSHQVREKSLASLRTRLPELFQAMSEVAYSCSDMYRAVTYVTKR
QSQSERHQKPSQGQSSKELL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgctcaatctaagatcgagaacgaagaagctgttactcgttgcaaagaacga
aaacagttgatgaaagatgccgtcacagctcgtaacgctttcgccgccgcacactcagct
tacgctatggctcttaaaaacaccggagctgctctttccgattactctcacggcgaattt
ttagtctctaatcactcatcctcctcctccgccgcagcaatcgcttctacttcttctctt
cccactgctatatctcctcctcttccttcttctatcgccgctatttctaattcaaccgct
tcttcttccgctgcggttcctcagccgattcctgatactcttcctcctcctcctcctcct
ccaccacctcttcctcttcaacgcgctgctactatgccggagatgaacggtagatccggt
ggtggtccttctggtaatggacttaacggaatcgaagaagatggaactctagataacgat
gatgatgatgatgatgattctgaattggagaatcgtgatcgtttggttaggaaatcgaga
agccgtggaggtaggacgacgattgaagatcatcatcaccaggaggagaaagctccgcca
cctcctccggcggtgaattcacggccaattcagccgccacgtcagcatcagcatcaacat
caacagcagcaacaacaacctttctatgattacttcttccctaatgttgagaatatgcct
ggaactactttagaagacactcctccacaaccacaaccacaaccacaaccaacaagacct
gtgcctcctcaaccacattcaccagtcgtcactgaaggagaagaagatgaggaggaggag
gaggaagatgaggaagatgaggaggaggaggaggaggaggaggcggtgcttgaacggaaa
ccaccggtggaagaaagaccgaagagagtggaggaagttagtgttgaattggaaaaggtt
actaatttgagagggatgaagaagagtaaagggatagggattcccggagagaggagagga
gtgagaattacgacggatttggcgaatgtattcaatgagcttgatgatagtttcttgaaa
gcttctgaaagtgctcatgaagtttcaaagatgcttgaagctactaggctccattaccat
tctaatttcgccgataaccgaggacatattgatcactctgctagagtgatgcgtgtaatt
acatggaatagatcgtttagaggaataccaaatgctgatgatgggaaagatgatgtcgat
ttggaagagaatgaaactcatgctactgttcttgacaaattactagcatgggaaaagaag
ctctacgacgaagtcaaggctggcgaacttatgaagatcgagtaccagaaaaaggttgct
catttaaatcgggtgaagaaacgaggtggccactcggattcattagagagagctaaagca
gcagttagtcatttgcatacaagatacatagttgatatgcaatctatggactccacagtt
tcagagataaatcgtcttcgggatgaacaactatacctaaagctcattctccttgtcgaa
gcgatggggaagatgtgggaaatgatgcaaatgcatcatcaaagacaagctgagatctca
aaggttttgaaatctctagacgtttcgcaagcggtgaaagaaacaaatgatcatcatcac
gaacgcaccatccagctcttggcggtggttcaagaatggcacacgcagttttgcaggatg
atagatcatcagaaagaatacataaaagcactcggcggatggctaaagctaaatctcatc
cctatcgaaagcacactcaaggagaaagtatcttcgcctcctcgagttcccaatcccgca
atccaaaaactcctccacgcttggtatgaccgtatagacaaaatccctgacgaaatggct
agaactgccataatcaatttcgcagcggttgtaagcacgataatgcagcagcaagaagac
gagataaatctcagaaacaaatgcgaagagacaaaaaaagaactgggaagaaaaatcaga
cagtttgaggaatggtactataaatacatgcagaagagaggaccggaagggatgaatccg
gaggggtcagaagcggataacgatcataaagacgaggtcatggtgcggcaattcaatgta
gaacaaattaagaagaggttggaagaagaagaagaagcttaccacaggcaaagccatcaa
gttagagagaagtcactggctagtcttcgaactcgcctccccgagctttttcaggcaatg
tccgaggttgcctattcatgttcagatatgtatagagctgttacgtatgtgactaagcgg
caaagccaaagcgaacggcatcagaaacctagccagggacagagttcgaaagaactactg
taa
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