Arabidopsis lyrata (lyrate rockcress): 9328171
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Entry
9328171 CDS
T01578
Name
(RefSeq) polygalacturonase At1g48100
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
9328171
NCBI-ProteinID:
XP_002892109
UniProt:
D7KB89
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MLTSTYNRNQILCFMTLILTLVSLTEARSHHHKEKRKHNNHNHHSSKPKPPSSSISQPPT
PPPGPPDSPAPSVPPSPSDEPGDDNNGIYNVRKYGAVGDGETDDTEAFKMAWDSACNNEN
NTDSVLLVPYGYTFMIQSTIFTGPCRSYQFFQVDGTIVTPDGPESWPSNISKRQWLVFYR
VNGMSLKGDGVIDGRGQKWWDLPCKPHRSVNKSAIVAGPCDSPIALRFFMSSNLRVEGLQ
IKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCVSI
GSGSYDVDIRNLTCGPGGHGISIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGG
SGSVSGVTFNNIHVDSVRNPIIIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRSPP
MHFGCSDAIPCTNLTLSDIELLPAKGEFVLDPFCWNAYGIAEELSIPPVWCLMSDPPKGL
QGSLVDKCGSS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttctacttataatcgcaatcaaatcctctgtttcatgacacttattctcaca
ttagtgtctctaaccgaagctcgaagccatcaccacaaagagaaacgcaaacacaataac
cataaccaccactcctctaaaccaaagccaccctcttcctcaatctctcagcctcctact
cctcctccggggccccctgactcacccgcaccgtcagtgccaccctcaccttctgacgag
cctggagatgacaacaacggaatctacaacgttagaaagtatggtgcggtgggagacggt
gaaaccgacgacactgaagcattcaaaatggcttgggactcagcttgtaacaacgagaac
aacaccgattcagtgttgcttgtcccttacggctatacattcatgattcaatcaactatt
ttcaccggtccttgccgctcttaccaatttttccaagtggatgggaccattgtaacaccc
gatggaccagagtcgtggccgagcaatataagtaagagacaatggcttgtgttctataga
gtcaacggaatgtctttgaaaggcgacggagttatcgacggccggggacaaaaatggtgg
gatcttccctgtaaacctcaccggagtgtcaacaaatctgctattgttgccggtccttgc
gatagccccattgctttgaggttctttatgagctcgaatctaagggtggaaggtctacag
ataaaaaacagcccgcagtttcatttcagattcgacggatgtcaaggagttcacgtcgag
tcccttcacatcactgctccaccgttaagtcccaacaccgacggcatccacatcgaaaac
tctaactccgttaccatctacaactccatcatctccaatggagatgattgtgtatcgatt
ggctccggatcatacgatgttgatatacggaatctcacttgtggacccggtggccatgga
attagtatcggaagtttgggcaatcacaactcacgagcatgcgtctcaaatataacggtt
agagactcggtgataaaatactctgacaatggtgttcggatcaaaacatggcaaggtggg
tccggttcggtctcaggcgtgacgttcaacaacatccacgtggactcagtccgtaaccca
ataattattgatcaatactattgcatgaccaaagattgtgcgaacaaaacatctgcggtt
tttgtatctgatattgcataccaaggcatcaaaggaacttacgatattcgaagtccccct
atgcattttggatgcagcgacgcaataccatgcacaaatctaactctttccgacatcgaa
ttgcttcctgccaaaggcgaattcgttttggatccgttttgttggaatgcttatggaatt
gcggaagagctttcgattcctccagtttggtgtcttatgtccgatcctcccaaggggttg
caaggatctcttgttgacaagtgtggttcatcgtga
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