Arabidopsis lyrata (lyrate rockcress): 9328192
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Entry
9328192 CDS
T01578
Name
(RefSeq) serine/arginine-rich-splicing factor SR34 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9328192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9328192
Spliceosome [BR:
aly03041
]
Common components
Common spliceosomal components
SR proteins
9328192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
9328192
NCBI-ProteinID:
XP_020866985
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED
AIQGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR
SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDGRGTTGVVDYTCYEDMKYAVKKL
DDTEFRNAFSHGYVRVREYDSRKDSRSPSRGRSYSRSRSRSRSRGRSLSRSRSRSRSRSR
SRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSPLPPVQKEASKSPSK
PSPAKSPIRTRSPSR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgttcgagtagaaccgtgtatgtcggaaaccttcctggcgatatccgtgag
agagaggttgaagatttgttcagtaagtatggacctgttgttcaaattgatttgaaggtc
cctccaaggcctcctggttatgctttcgttgagtttgatgatgctcgggatgctgaagat
gctattcaaggtcgggatggctatgactttgatgggcatcgtttgcgggtggaattggcg
catggtgggaggcgttcatcagatgatactaggggtagtttcaatggtggtggccgtggt
ggtggacgtggccgcggtgatggccgtggtgatggtggtagtcgtggcccatctaggaga
tcagagtttcgtgttctggtgacaggcttgccttcttctgcttcttggcaagatctcaag
gatcacatgcgtaaaggaggggacgtctgtttctcgcaagtgtaccgtgatggtagaggt
acaactggagttgtggattacacctgctacgaggacatgaagtatgcggtgaaaaagctc
gacgacacagagtttcgaaatgcgttttctcatggatatgttcgggttagagaatacgat
tcaaggaaggattctaggagtcctagccggggaagatcctattctaggagtcgcagccgc
agccgcagccgtgggcgaagcttgagccgaagcaggagcaggagcaggagcagaagcagg
agcaggagcaggagcagaagtccaaaggcaaagtcttcacgtaggtcccctgcaaaatct
acatcaagatctcctggcccccgctcgaagtcaaggtcaccgtctccaagaagatcgcgt
tcaagatcaagatctcctctacctcctgttcagaaggaagcaagcaagagccctagcaag
ccaagtccagccaagagccctatccgtactaggagtccatcgcggtaa
DBGET
integrated database retrieval system
