Arabidopsis lyrata (lyrate rockcress): 9328229
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Entry
9328229 CDS
T01578
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9328229
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
9328229
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
SR-25
Motif
Other DBs
NCBI-GeneID:
9328229
NCBI-ProteinID:
XP_002892167
UniProt:
D7KCF9
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MVGFPPNPAITVKEELALQVVVDQDPKVKTFKDSIDFPSIDSYLDFDSVTWLGSYRNGEE
FSIEDTDFDFFEDGMEIPQEGVVTVSDVMRPESIEVKPELCDDMSGEVGVSSVRSVSMVE
VKPVLCDVMSEEVGESSIKSESMVEVEPNVCVDMSANGGDEPAVKDSEPVVSENSRSMEG
ETEPVVVSAPCPTMDLDESGLKKTDESLACSIEVGLKKVSLAMDDDEKNDGDKGKIDSAE
SDSETSSSSSSSSDSSSSEEEESDEDESDEEEKKKEEKFEDHMVMGKEDDLAGELEEGEI
ENLDEEDGDDEIEDDEDDDADDDDDEAMVAWSNDEDDDLGLQTKEPIRSKNELKELPPVP
AVDVTLEPHHATLPVGVVLSVMSTQVIVEGMEKHSPLTEGSILWITEKRTPLGLVDEIFG
PVKCPFYIVRFNSESEVPEGVSQGTPVSFVADFAQHILNIKELQKKGYDASGDNDEEIPD
ELEFSDDEKEAEYRRMQKMEKRGMMNDQKTGNTRNKKKKNRDLGRPTSSYSGEWTENQGS
SPLSSNRSDPQMGGPLSNLGPRPQMDGFPPNNAAWRPQSNQQNPYQLPHIPNQMGMPNLA
PMQIPFMAMQNQNQMMFQPQFNGGQMPMPGGPGGLNFFPGQASEPWPALVGQNCFNQPFG
MGRGIQQQPLPNELSFNLFSQGLQMHPPQSQMHRPQSQMNPHFQMPPQFQTNPQSPMNPQ
YQMMHRPQSPMNLQFQMQPQSDVRPPQSQIPQSPTILQSPMESQSQGFSSGQSSERGRGF
RGRGRGRGRGRFGRGRGRGRQQSG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggttggatttccccctaatccagctataacagttaaagaagagctagctttgcaagtt
gtagtcgatcaagaccccaaggtaaaaactttcaaggactctattgatttcccctccatc
gattcctatctggatttcgattccgtcacttggttggggagttatcggaacggtgaggag
tttagcatagaagatacggactttgatttctttgaggacggaatggagatacctcaagaa
ggcgttgttactgttagcgatgtaatgcgtcctgagtcgattgaagtaaagcctgagctt
tgtgatgacatgtctggggaagttggtgtgagttcggttaggtctgtgtcgatggttgaa
gtaaagcctgtgctttgtgatgtcatgtctgaggaagttggagagagctcaattaagtct
gagtcgatggttgaggtagagcccaatgtttgtgttgacatgtctgcaaacggtggggat
gaaccagcagtgaaagattcagaaccggttgtttctgaaaactctaggtcaatggaaggt
gagactgagccagttgttgtgtctgctccttgtcccaccatggatttggatgaatcaggg
ttgaagaaaacagatgagagtttggcttgttctattgaagtagggttgaagaaggtaagt
ttggccatggatgatgatgagaagaatgacggggataagggaaaaattgattctgctgag
tctgacagtgaaacatcgagctcttcttctagcagtagtgatagtagtagcagtgaagaa
gaggagagtgatgaggacgagagcgacgaagaggaaaagaagaaggaagaaaagtttgaa
gatcacatggttatggggaaagaggatgatctagcaggggaacttgaagagggtgagata
gagaatttagatgaggaggatggggatgacgaaattgaggatgacgaagatgatgatgct
gatgatgacgatgatgaagcgatggttgcttggagcaatgatgaggatgatgacctcggt
ttacaaacaaaagaacctataaggtcaaagaatgagctcaaggagcttcctccagttcca
gctgtggatgtcactctggaaccacatcatgccacacttcctgttggagttgttctttcg
gtaatgagcacacaagtaatagttgagggaatggaaaagcatagtcctttgactgaaggt
tctatcctttggataactgaaaaaagaacgccattgggactggtggatgagatctttgga
ccagtaaagtgccctttctatattgtgaggttcaattcagagagtgaagtgccagaaggg
gttagtcaagggacacctgtctcatttgtcgccgatttcgctcaacacattctcaatatc
aaggaactgcagaagaaaggttacgatgcatctggtgataacgacgaggagataccagac
gagctagagttctcagatgatgaaaaagaagccgaatacagaagaatgcagaagatggaa
aagagaggaatgatgaatgaccagaaaacgggtaacactaggaacaagaagaagaaaaac
cgagatctcggaaggcctaccagcagttactcaggggaatggacagagaaccagggatct
agtcccctatcctcaaaccgttctgatcctcaaatgggtggtccgctttcaaatcttggt
ccgcgtcctcaaatggacggttttcctccaaacaatgcagcatggagaccccagagtaat
cagcagaacccatatcagcttcctcatatacctaatcagatgggaatgcccaatctagcc
ccaatgcagatacctttcatggcaatgcaaaatcaaaatcaaatgatgttccaaccgcag
ttcaatggtggccagatgccaatgccaggtggaccgggaggcttaaacttctttccagga
caggcttcagagccatggcctgcattggttggtcagaattgtttcaaccaaccatttggg
atgggtcgcggtattcagcagcagccattaccaaatgagctgagttttaatctgttttct
caaggtcttcaaatgcacccgccacagtcccaaatgcaccggccacagtctcaaatgaat
ccacatttccaaatgccaccacagttccaaaccaacccgcaatctccaatgaacccgcag
taccaaatgatgcaccgaccacagtctccaatgaacctgcagttccaaatgcaaccacaa
tctgatgtgcgaccaccacagtcacaaatcccgcagtcaccaacaattctgcagtcccca
atggaatcacagtctcaagggtttagcagcgggcagtcttctgaacggggaaggggcttc
cgtggtcgtgggaggggtaggggtcggggtcgcttcggacgtgggcgaggtcgaggccgg
caacagtctggatga
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