Arabidopsis lyrata (lyrate rockcress): 9328619
Help
Entry
9328619 CDS
T01578
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g10270 isoform X1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
TPR_19
PPR_3
TPR_1
TPR_12
TPR_16
TPR_2
PPR_long
Clathrin
ARMC9_LisH
Motif
Other DBs
NCBI-GeneID:
9328619
NCBI-ProteinID:
XP_002889798
UniProt:
D7KKN8
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MSLSHLLRRLCTTTTTTRSPLSISFLHQRIHNISLSPANEDPETTTGNNQDSEKNPNPNP
IPNDPSQFQIPQNHTPPIPYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDP
SAPPPKRDPNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTV
FTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYR
HILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDL
GDFDKAIEFFDELKSKCTVYDGIVNATFMEHWFEKGNDKEAMESYRSLLDKKFRMHPPTG
NVLLEVFLKYGKKDEAWALFNEMLDNHTPPNILSVNSDTVSIMVNECFKMGEFSEAINTF
KKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSKSLPADAPSHRAMIDA
YLKAERMDDALKMLDRMVDVNLRVVADFGTRVFGELIKNGKLTESAEVLTKMGEREPKPD
PSIYDVVVRGLCDGDALDQAKDIVGDMIRHNVGVTTVLREFTIEVFEKAGRREEIEKILN
SVARPVRNAGQSGNTPPSVPAVFGTTPAAPQQPRDRSPWTSQGVVHSNSGWANGTAGQTA
GGAYKANNGQNPSWSNTSVNQQQQSWSNQTAGQQPPSWSRQAPGYQQQQSWSQQSGWSSP
SGHQQSWTNQTAGQHQPWANQTSGQQQQWANQTPGQQQQWANQTPGQQQQWATQTPGQQQ
QWANQNNGHQQPWANQNTGHQQSWANQTPSQQQPWANQTTGQQQGWGNQTTGQQQQWANQ
TAGQQSAWTGQQQWSNQTASHQQSQWSNPVPGEVANQTPRSHSVDSHLPQQQEPGSSHEC
LDTQEKKVVELRN
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcagtcacctcctccgccgtctctgtacaaccaccaccactacccgtagccct
ctttcgatctccttcctccaccaacgcatccacaacatctcactttccccggcaaatgaa
gatccggagacgaccactggtaataatcaggattcagagaaaaatccaaaccctaatcca
attccaaatgatccttcccaattccagattcctcagaatcacacccctccaattccctat
ccaccgatcccgcatcgtaccatggccttctcttcagccgaagaagccgctgctgagcgc
cgccgccgtaaacgtcgtctccgaattgaacctcctctccacgctctccgtcgcgatcct
tcagctcctcctccaaaacgtgatcccaatgctccacggcttccggattcaacttccgca
ctcgtcggccaaaggcttaaccttcacaacagagtccaatcactgatcagagcatcagac
ctcgacgctgcatcaaagctcgctcgccagtctgtgttttccaatactcgacctactgtc
ttcacctgtaacgccatcatcgccgctatgtaccgagccaagcgttacagtgaatcgatt
tctctgtttcagtatttctttaagcagtctaacatcgtccccaatgtagtctcatacaat
cagatcatcaacgctcattgtgatgaagggaatgtcgacgaagcccttgaagtgtacaga
cacatattggctaatgctccttttgctccatcctcagttacttatagacatttgaccaaa
ggcttggttcaagctggaaggatcggagatgctgcgagtttactaagggagatgttgagc
aaaggtcaagctgcggattcgacggtgtataacaatctgattagaggatatttagacctt
ggtgatttcgataaggctattgagttctttgatgaattgaagtctaagtgtactgtttat
gatgggattgtcaatgccacctttatggagcactggttcgagaaagggaatgataaggaa
gctatggagtcttacaggtctttgttagataagaaattcagaatgcatcctccgactggt
aatgtacttttggaagtttttctcaagtatggtaagaaggatgaagcttgggctttgttt
aatgagatgttggataatcacactcctccgaatatcctttccgtgaattcggatacggtt
agtataatggtcaatgaatgtttcaagatgggagagtttagtgaagcgattaatacattc
aagaaggtcggaagtaaggtcacctccaaaccgtttgtgatggattatttaggttactgt
aacatagtaacaaggttctgtgaacaagggatgttaacagaagctgaaaggttctttgct
gaaggtgtatctaaatctttgcctgctgatgctccaagccatagagcaatgatcgatgct
tatctcaaggcagaaagaatggacgatgctctcaagatgttggacaggatggttgatgtg
aatctacgggtggttgctgatttcggtacgagagtctttggcgagctgattaagaatggt
aagcttacggaatctgctgaagttttgactaagatgggagagagggaaccaaaaccagat
ccttccatttatgatgtggtggttagaggtctttgtgatggtgatgcacttgaccaagcc
aaggacattgttggtgatatgattagacataatgttggggttactactgtgctgcgggaa
ttcaccattgaggtttttgagaaggcaggacgtcgtgaggagattgagaaaattttgaac
tctgttgcccggccggttagaaacgctgggcagtctggtaacactccacctagtgtaccc
gcagtgtttggaaccacacctgcagctccgcagcagcctagagacaggtccccatggacg
agccaaggagtggtgcattccaattcaggttgggccaatggaactgcaggtcaaacagca
ggaggagcttacaaggctaataatggccagaatccctcttggtccaacacgtctgttaac
cagcagcaacaatcgtggtcgaatcagacggcagggcaacagccaccgtcatggtcgaga
caggcaccgggatatcaacagcagcaatcttggtctcagcaatcggggtggtcaagtcct
tcaggtcatcagcaatcatggactaatcagacagctggccagcaccaaccttgggctaat
cagacgtctggtcagcagcaacagtgggctaatcaaactcctggccagcagcaacaatgg
gctaatcagacgcctggccagcagcaacagtgggctactcaaacgcctggccagcagcaa
caatgggctaatcagaataatggtcaccagcaaccgtgggctaaccagaacactggtcat
cagcaatcatgggctaatcagactcctagccagcagcaaccatgggctaatcagacaacc
ggccagcaacaagggtggggaaatcagacaaccggccagcaacagcagtgggctaaccag
acagctggccagcagtcagcatggacagggcagcaacagtggtctaatcagacagctagc
catcagcagtcacagtggtcaaatcccgtgccaggagaggtggctaatcagacaccgagg
tcacactctgtggacagtcatcttcctcaacaacaggagccagggtcctcccatgagtgc
cttgacacacaagaaaaaaaggtagtggagttgaggaactag
DBGET
integrated database retrieval system
