Arabidopsis lyrata (lyrate rockcress): 9329553
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Entry
9329553 CDS
T01578
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9329553
03400 DNA repair and recombination proteins [BR:
aly03400
]
9329553
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
9329553
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
9329553
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
9329553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5382_C
Motif
Other DBs
NCBI-GeneID:
9329553
NCBI-ProteinID:
XP_020866376
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MDSDSDSDGSHVSATPPRDSFPPSPPPLLQPPPKYVPPVSRKITSSSSRSKPKAPTQPPP
NPSQEAPTSFSPPPPPPSPLFTDLPFRICESQPARFSSSISSFSRLRSRASFTPNEKLKS
DGVDFVPEPPQVEVIAPPKSLRRKPPNLITDTITSPPKSVRRKPPNLITDTITSPPVKPM
VFRSSGNGEGNFVKLNLNGKRGKKFPSKYKGVSKSRSNYAFRGKRYKKKEADGDGESLLE
EESDLQKQVEEEANGFISSVEDAILAVKTEASDENLTKLLNLVYGYDSFRDGQLEAIKMI
LGGSSTMLVLPTGAGKSLCYQIPAMILPGITLVVSPLVSLMIDQLKHLPSIIKGGLLSSS
QRPEETTETLRKLREGIIKVLFVSPERLLNVEFLSMFRMSLSVPLVVVDEAHCVSEWSHN
FRPSYMRLKASMLFSELKAKCILAMTATATTMTLQAVMSALEIPSTNLIQKSQLRDNFEL
SVSLSGANRMKDLLILMESHPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLP
AKDRVRIQESFCSNKIRVVVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDG
RLSYCHLFYDNDTYLKLRSLAHSDGVDEYAVGKFLTHVFSTETKQHEKICSLVIESASQK
FDMKEEVMQTILTHLELGEVQYLRMLPQLNICCTLNFHKSSPNTLAARNTIVAAILKKSH
VKQGLHVFDITAVASSICVATTDVLAEIQTLKMKGEVTYELKDPAFCYTILKSPREICSL
SSHLTKWLTEIESCKVRKLDIMSSAAVAAISVSNTSELSSGAKQTLSLQSRIFDYFNGDE
KCDTPSKTTQNCAFLRADIKVFLQSNRQAKFTPRAIARIMHGVGSPAFPNSVWSKTHFWG
RYMSVEFRVIMDAAQTELFNFVDRNAALAT
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggattccgattcagactccgatggttctcatgtctccgccactcctccccgagactca
tttccgccatcgccgccgccacttcttcagccaccgcctaagtatgtgccgccggtctcc
cggaaaattacgtcttcttcctctcgctcgaagcccaaagcacctacacagccgcctcct
aatccctcacaggaagctccgacatcattctcccctcctcctcctcctccatctccatta
ttcaccgatctccctttccggatctgcgaatcccaacccgctaggttttcttcttccata
tcgtccttttccagactccgcagcagagcttcttttacacctaatgagaaattgaaatca
gacggcgtcgattttgtgccggagcctcctcaggtagaagtaatcgctcctccaaaatcc
cttaggagaaagcctccgaatctcatcaccgatactataacttctcctccaaaatctgtt
aggagaaagcctccgaatctcatcaccgacactataacttctcctccggtgaaacctatg
gtgtttcgtagcagcggtaacggcgagggtaatttcgtgaagttgaacttaaatggcaag
agagggaagaagtttcctagcaaatacaagggcgtctctaaatctagaagcaattacgca
ttcagagggaagagatacaagaagaaagaagctgatggtgatggcgaatcattgttggag
gaagagtctgatttgcagaaacaggtagaagaagaagctaatggttttattagctcagtg
gaggatgccattcttgctgtgaagactgaggcttctgatgagaatctaacgaagctgttg
aatttagtttatggttatgattcttttcgagatgggcagttggaggcgatcaagatgatt
cttggtgggagttcaacgatgctggtattgcctactggtgctggtaagtctctctgctac
cagattccggcaatgattcttccgggaatcacgcttgtagtgagtcctttggtttcgctg
atgatcgatcagttgaagcatttgccttcgattattaagggtggtctcttgagcagtagc
cagagacctgaggaaacaacggagacgttgcggaaactcagagaaggcataattaaggtt
ctctttgtatctcccgagagacttctgaatgtagaatttctgtcgatgtttcgcatgtct
ctatctgtgccacttgtcgttgtggatgaggcacactgcgtatcagaatggtctcataat
ttccgtccttcatatatgagactcaaggcatcaatgctgttttctgaactcaaggcaaaa
tgcattctcgcgatgactgcaactgccactacaatgactcttcaggctgtcatgtctgca
ctagagataccgtcaaccaatcttattcagaagtcacaactgagagacaattttgagttg
tctgtctcattgagtggagctaacagaatgaaagatctattgattttgatggagtctcat
ccatataaggagattcgaagcatcattgtgtactgcaaatttcagtatgagactgacatg
ataagcaagtatttacgtgataacaacatcaatgcaaagggttatcacagtggtcttcct
gcgaaggaccgtgttcgcatacaagagtcattttgttccaacaagattagagtggttgtt
gcaactgtggcattcggcatgggacttgacaagggagatgttggagctgtaatccacttc
agcgtgccaggcagtatggaagaatacgttcaggaaattgggcgtgctggtcgcgacggg
aggttgtcttattgtcatctcttttatgataatgacacatatctaaagcttcggagcctt
gcacacagtgatggtgtcgatgaatatgcagttggaaaatttctcacccatgtgttttcc
actgagacaaagcaacatgagaagatatgctcgctagtcattgaatctgcctctcaaaaa
tttgatatgaaggaagaggttatgcaaacgattttgacacatttggagctgggggaagtg
cagtacctacgtatgcttccacaactcaacatatgttgcactttgaatttccacaagtct
tctccaaacactctggctgcacgaaataccatagttgcagcaattctgaagaagtctcac
gtgaagcaagggttacatgtcttcgatataaccgctgtggcctctagcatatgtgttgca
acaacagatgtcttggctgagattcaaactctgaagatgaagggggaagtaacatacgaa
ttgaaggacccagccttttgttacacaatcttaaaatctccaagggaaatatgttcattg
tccagtcatcttaccaagtggctcacagagattgaaagttgcaaagtgagaaaactggat
attatgtctagtgcagctgtggctgcgattagtgtctctaacacttcagaactgagttct
ggtgccaagcaaactctgagcctgcaaagtagaatttttgattacttcaatggtgacgaa
aagtgtgacactccgagcaagacgactcaaaattgtgcctttctacgagcagacataaag
gtttttttgcagagtaatcgccaagccaaattcacaccaagagccatcgcgagaataatg
catggagttggaagtccagcttttccaaattcagtctggtccaagactcatttctgggga
aggtatatgagcgtagagttccgtgtgataatggatgcggcacaaacagagctgttcaat
tttgttgacagaaatgcagctttagctacatag
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