Alteromonas mediterranea DE1: amad1_04940
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Entry
amad1_04940 CDS
T02340
Name
(GenBank) transglycosylase, SLT family protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amaa01011
]
amad1_04940
Enzymes [BR:
amaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
amad1_04940
Peptidoglycan biosynthesis and degradation proteins [BR:
amaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
amad1_04940
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Phosphonate-bd
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AFV84512
LinkDB
All DBs
Position
complement(1099920..1101311)
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AA seq
463 aa
AA seq
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MQSQDYKKRLKLQIVIILSIAVMSCGVPNVPTALSSLLERESIRVGTVYGAGTFYNGAEG
PQGFEYELLAGFADYLGVTLDLYPFYSYEVMLEQLEEGNLDIVATGDAVTPALKRRFAYG
PAYQRVEQELVFQAGATRPRDLAELDSPIIAVAGSSQAHLLSNLFERLSEEEDEAVQTQL
ITTEDSDSEELLQQVANGDIAYTVADSNRLALQRRRYPNLAVARTLNENMPMAWALPLQQ
DDSVKAALIEYFGTVHQSGWFTVLEDKYFGHIRQFDYVDSRAFNYAAESTLTQYKSLFQK
YAGDLDWRLLAAMSYQESHWNSDAISRTGVRGLMMLTLATASDWNVDDRTDPEQSIRGGS
RYFASLLNRIPARISEPDRTWMAMASYNIGMGHLEDARILTEQQGGNPDLWVDVKRRLPQ
LRQKKYYRTTRYGYARGDEALQYVENIRRYYDSLVWLDEQGKI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcacaagactataaaaaacgattaaaactacaaatagtaatcatattatctatt
gctgtaatgagttgtggggtgccaaacgtgcccactgctctgtcttcgttattagaaagg
gaatctattcgtgtaggcacagtttacggtgcgggcacattttacaatggtgcagaaggg
ccgcaggggttcgaatacgaattactggctggtttcgccgattatcttggggtaacactc
gatttgtaccctttttacagctacgaggtcatgcttgaacaactcgaagaaggcaattta
gacatcgtcgctaccggagacgccgttacgccagcgctaaaacgtcgttttgcttatgga
cctgcctaccagcgtgtagagcaggaactcgtatttcaagctggcgcaaccagacctaga
gacttggcagagctagactctcctattattgcggtagcaggcagcagccaggctcacctt
ttatctaatcttttcgaacgtttaagtgaagaagaggatgaagcagttcagactcaatta
attaccactgaagactcagactcagaagaattacttcaacaggtcgccaacggtgatatt
gcctatacggttgcagatagtaatcgcttagccctacagcgcagacgttatccaaatttg
gctgtcgcacgaacgcttaatgaaaatatgcctatggcatgggcgttgcctttacaacaa
gatgactcggttaaagcggcgttaattgaatattttggcacagtacaccaatctggatgg
tttaccgtgttagaagataagtactttggtcatattcgccagtttgattatgtagatagc
cgagcattcaattacgccgcagagtctacccttactcaatataagtctttatttcaaaag
tatgcaggcgatttagattggcgccttctagccgcaatgagctaccaagaaagccattgg
aacagtgatgcgatttcaagaacaggggtgcgggggctgatgatgcttacattagctacc
gccagcgactggaatgtagacgatagaaccgaccctgaacaaagtattcgaggaggctcg
cgctatttcgccagtttattaaatagaatacctgcgcgtatcagtgaaccagacagaacc
tggatggcgatggcatcgtataatatcggtatgggtcatttagaagatgcgcgcatttta
acagaacaacaagggggtaaccccgatctttgggttgacgttaaacgccgcctgccgcag
ttgcggcaaaaaaagtactaccgcactacccgctatggctacgcaagaggcgatgaagca
ttgcaatatgttgagaacattcgccgctattacgacagcttagtgtggttagacgaacaa
ggaaaaatttaa
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