Alteromonas mediterranea MED64: I533_00070
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Entry
I533_00070 CDS
T02958
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag03030
DNA replication
amag03410
Base excision repair
amag03420
Nucleotide excision repair
amag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I533_00070
03410 Base excision repair
I533_00070
03420 Nucleotide excision repair
I533_00070
03440 Homologous recombination
I533_00070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amag03032
]
I533_00070
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_00070
Enzymes [BR:
amag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I533_00070
DNA replication proteins [BR:
amag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I533_00070
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I533_00070
NER (nucleotide excision repair)
GGR (global genome repair) factors
I533_00070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGP80011
LinkDB
All DBs
Position
complement(14849..17641)
Genome browser
AA seq
930 aa
AA seq
DB search
MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV
IFDAKGKTFRDDIYKEYKANRPPMPEELRSQIAPLHTIIKAMGLPVIVESGVEADDVIGT
LAKHATEKGIDTLISTGDKDMAQLVNKHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDEIYKNLDKIADLSFRGSKSMAAKMEEYE
EQARLSYTLATISIDLELDYDVETLMPCQADNEQLRDLFAEYEFKRWHAEVSALLAGGDT
SSATESTSAESSDSTQTSESATSGDIDKSKYETVLDEETFNTWLGKLQKAQLIAFDTETT
SLNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPTQLSREFVLDALKPILESNDIIKVGQ
HIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEDIAGK
GAKQLTFNQIALEEAGPYAAEDADITLRLHNTIWAKLKEIPELKNLLIDVEVPLACVLSR
MEQEGVLIDSQRLSQQSQDLAARIAELEKEVHEEAGEPFNLGSTKQLQHILFEKMSLPII
KKTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAITATGRLSSTDPNLQNIPIRNEEGRRVRQAFVPRKGNKFVAADYSQIELRIMAHLSG
DKGLLDAFAHGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLAKQLNI
PRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWISKNAADDVTMMMQVHDELVFEIKEDKVDSYVK
TINTLMESAATLNVPLVVEAGVGENWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattctaaaaagccgccatttattcttgttgatggatcgtcttatctctttcgt
gcttttcacggtctaccacctttaaccaactcaaaaggtcaagacaccggcgctatttac
ggcgttgtaaatatgctcaagagcctgatcaaacaatataacccaactcacatggcggtt
atttttgacgctaaaggcaaaacctttcgcgacgatatttataaagaatataaagctaac
cgcccgcctatgccggaagagctaagaagtcagatcgcgcccttacacacgattatcaaa
gcgatgggtctaccggttattgttgagtcgggtgtggaagctgatgatgttattggtaca
ttagcaaagcacgccacagaaaaagggatcgatacacttatcagtacgggcgacaaagat
atggctcaactggtgaacaagcatgtcacactaatcaataccatgactaaccagcttatg
gatgtggaaggtgtaaatactaaattcggtatccctcctgaacttgtgatcgactttctc
gcgcttaaaggcgacaaggttgataacatcccaggcgtgccaggggttggtgataaaagc
gctcaagcactattaaacggtatcggcggtattgacgagatatataagaatttagacaag
atcgccgacctttcatttagaggcagtaagtcgatggctgctaaaatggaagagtatgaa
gaacaggcccgcctttcttacaccctcgccacgattagtatcgatctggaattggactac
gatgtcgaaacgctaatgccttgccaagccgacaatgaacaacttcgcgatctatttgcc
gaatacgagtttaagcgttggcacgctgaagtgagtgcgttgttagcaggcggcgataca
tctagtgctacagaatccacaagcgctgaaagcagcgactctacgcaaacgagtgaatct
gcgacatctggcgatattgataagtctaagtatgagaccgtgctagatgaagaaacattt
aatacttggcttggcaaattgcaaaaagcacagctcattgcgtttgatactgaaacgacc
agccttaattatatggatgcagagcttgttggcgtctcattttgtattgaagaaggtgag
gctgcctatgtacctgtagcgcatgattacccagatgctccgacacagttatctcgcgag
tttgtattagatgcacttaagcctattttagaatcgaacgatatcattaaagtaggccag
catatcaaatacgataaaaacgtattggcaaactacgacattacgttgaacggtattggc
tttgacaccatgcttgagagttatgtgcttaacagcactgcacaacgtcacgacatggac
tcccttgctcttgcctatctcggccacaaaaccattcactttgaagacattgccggtaaa
ggggcgaagcaacttacgtttaaccaaattgctcttgaggaagctgggccgtatgctgct
gaagatgcggatattacgcttcgcttgcacaatacaatatgggctaagctgaaagaaatt
ccagagcttaagaacttgttaattgatgtagaagtgccccttgcttgcgtactgtcgcga
atggagcaagaaggggtattaattgatagtcaaagattgagtcagcaaagccaagatctt
gccgcccgtatcgctgagctggaaaaagaagtccatgaagaagccggcgaaccatttaac
cttggttcaacaaagcagcttcaacatattctatttgaaaagatgtcgctgcccataata
aagaaaacgcctaaaggcgcgccatcaacgtctgaagacgtgctacaggagcttgccctt
gaatacccgcttcccaagaaaattatggaataccggggattaaccaagttgaaaaatacc
tacaccgataagcttccaaagatgatcaatcatcgaacaggccgtgtccacacatcttac
catcaggccataacagccaccggaagactctcttctaccgatccgaatttacaaaacatc
cctattcgcaacgaagaaggccgtcgtgtacgccaagcctttgttccccgtaaaggaaac
aagtttgttgctgccgattactcgcaaattgaactgcgcattatggctcatctgtcaggg
gataaaggtctgttagatgcgtttgcacatggcaaagatatacataaagccaccgcatca
gaggtatttggggtgccgcttgacgaagtaacaaccgaacagcgacgtagcgctaaggcc
attaactttggccttatttacggcatgagtgcatttgggttggctaagcaattaaatatt
ccccgtaatgaagcccagaaatacatggatctttacttcgaacgttaccctggtgtactt
gaatatatggactcaacccgcgagagtgcaaaagaaaaaggctatgttgaaacggtattt
ggccgacgtctttacctgccagatattaaagcaagcaatggtgcccgtagaaaaggcgca
gaacgcgccgctatcaatgcgcctatgcagggtacagccgcagacatcattaaaatggct
atgatcaaagtggatgactggatttcaaagaatgccgcagacgatgtcactatgatgatg
caagtgcacgatgagttagtgttcgaaataaaagaagataaagtcgatagctatgtgaag
accatcaacacgcttatggaaagcgctgcaacgcttaatgtaccgcttgttgttgaagcg
ggtgttggtgaaaactgggacgaagcgcactag
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