Actinomadura madurae: LUW76_40025
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Entry
LUW76_40025 CDS
T08933
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amaz
Actinomadura madurae
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amaz03016
]
LUW76_40025 (truB)
Enzymes [BR:
amaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LUW76_40025 (truB)
Transfer RNA biogenesis [BR:
amaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LUW76_40025 (truB)
Prokaryotic type
LUW76_40025 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
URN00013
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All DBs
Position
8408674..8409546
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AA seq
290 aa
AA seq
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MENSGLVIVDKPAGWTSHDVVGRMRRLAKTRRVGHAGTLDPMATGVLVLGVGKATRLLGH
LALTEKGYDATIRLGESTNTDDAEGETTATASAAGVTDEALRAGVAELTGPIRQIPPQVS
AIKVNGQRAYKMARKGEEVELAARPVTVHAFTVLDVRRHGDLIDLDASIACSSGTYIRSL
ARDLGASLGCGGHLTALRRTRVGPYDLSTARTLERLAEKMEFLPMDEAVAAVFPRRDVSD
EDARKVAHGGRLPAAGLGPGPVGVFAPDGTLLALVEEQGRVAKPLAVFVP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggagaactcgggactcgtcatcgtggacaagcccgccggctggacgtcgcacgacgtc
gtcgggaggatgcggcggctggcgaagacccggcgggtcgggcacgccggcacgctggac
cccatggcgacgggcgtcctggtgctcggggtgggcaaggcgacgcgcctgctcgggcat
ctcgcgctgacggagaagggctacgacgccacgatccggctgggcgagtcgaccaacacc
gacgacgccgagggcgagaccaccgcgaccgcgtccgccgcgggcgtcaccgacgaggcg
ctgcgggcgggcgtcgcggagctgaccgggccgatccggcagatcccgccgcaggtcagc
gcgatcaaggtgaacggtcagcgggcctacaagatggcccgcaagggcgaggaggtcgag
ctggccgcccgcccggtgaccgtgcacgccttcacggtgctggacgtgcggcggcacggg
gacctgatcgacctggacgcgtccatcgcctgctcgtccgggacctacatccggtcgctg
gcccgcgacctcggcgcctcgctcggctgcggcggccacctgaccgcgctgcggcgcacg
cgcgtcgggccgtacgacctctccacggcgcggacgctggagcggctcgccgaaaagatg
gagttcctgccgatggacgaggccgtcgcggcggtgttcccgcggcgggacgtgtccgac
gaggacgcccggaaggtcgcgcacggcgggcgcctcccggccgcggggctcggcccgggt
ccggtcggcgtcttcgcgccggacgggacgctgctcgccctcgtcgaggagcagggcagg
gtggccaagcccctcgccgtcttcgtcccctga
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